Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g464 ATGGAGGCTAAAATTGGGGGTGAAGCTCACCATTTCTATGGTATCGGGACTTCTGATTTGCGTGTGGTGGGGAAGAGGAGTTCGGAATGGGATTCGAATGAGTGGAAATGGGATGGTGATCTTTTCATAGCCAGTCCCATGAATCCAGTGCCCTCAGATTACACGAGCCAGCAATTTTTCCCACATGGCTCGGCAATTCCAAAAAGGAAAAGGGAATTGGAGAAACGTAGGAGGGTTATCGTTGTCCAAGACGACAATGATGAAACTGGGACTCTTTCTCTAAAGCTTGGTGGGCATGGACATTCGGTTTCTGAAAGGGAGGTGGGAAATTGGGAAGGGACAAGTGGGAAGAAGACCAAATTGGCTGGAGTTAGTTCCAGTCGCGCTGTTTGTCAGGTAGAGGACTGTGGGGCTGATCTAAGCAAAGCCAAGGATTATCACAGACGACATAAGGTCTGTGAGATGCATTCAAAGGCCGGTTGCGCCCTGGTGGGAAATGATATGCAACGATTCTGTCAGCAGTGTAGTAGGTTTCATGTCCTTCAAGAGTTTGATGAGGGGAAAAGGAGTTGTCGGAGACGTTTAGCTGGCCATAATAAACGGAGGAGGAAGACACATCCAGATGCTGCCGGTAATGGAAATTCCTTGAATGATGATCAGGCTAGTGGTTATCTCTTGATAAGTTTACTGAGGATACTTTCCAACATGCATTCCAATGATAAATCAGATCAGACTAAGGATCAGGATCTGCTGTCCCATCTTTTAAGAAGCCTTGCCAGCTATGGTGGTACAAATGGGAGTAGAAACATATCAGGGCTCCTTCAGGAATCTCAACTGCTGAATGATGGGATTTCTGTTGGAAATACAGAAGTGGTTTCGGCTCTGCTCCCAAATGGGGTACATGCAGATGAAGCTAGGGTTGGAAATATGCAAATGACTTCTTGGCAGATCAAGTTGAATAATTTTGATTTGAATGACATATATATTGATTCAGATGATGGCATGGAAGATCTGGAGAGATCGCCTGTCCCTGAGAATCTGGGGACTGGTTCTCTTGAATGTCCCTCATGGGTACAACAAGACTCTCATCAATCAAGTCCACCTCAGACAAGTGGCAATTCTGATTCAGCATCTGCCCAGTCACCTTCTAGTTCCAGTGGAGAGGCTCAGAGCCGCACCGATCGGATTGTTTTCAAACTATTTGGGAAAGAACCAAATGATTTTCCTCTTGTTCTGCGAGCACAGATTCTTGACTGGTTATCTCATAGTCCTACTGACATTGAGAGCTACATTAGGCCTGGTTGTATTGTTCTAACAATTTATCTTCGTCTACCTGAGTCCACATGGGAGGAGCTTTGCTGTGATCTGGGTTCCAGTTTGAGTAGGCTTCTGGATGTCTCAAATGATACTTTCTGGAGAACTGGATGGGTGTATATTAGAGTGCAGCATCAAATAGCATTTATCTACAACGGTCAGGTTGTTGTAGACATGTCCTTACCTCTCAAGACTAATAATTATAGCAAAATTTTAAGCATCAAACCTATTGCAATATCTATGTCTGAGGAAGCTCAATTTTTGGTTAAAGGCTTTAACCTGTCTCGGCCAGCCACAAGGTTACTCTGTGCACTAGAAGGAAAGTATCTTGTTAAGGAAGCAACTCATGAGTTAATGGATGATATTGATAGTGTGAAGGAGCATGATGAGCTCCAGTATCTCAACTTCTCTTGCTCTATTCCCAAAATGACTGGAAGAGGATTCATTGAGGTTGAAGATCACGGTCTCAGCAGCAGCTTCTTTCCCATTATAGTTGCAGAGAAGGATGTTTGTTCAGAGATCTGTATGCTTGAGAGTACGATAGAGATGACTGACATTGATGAAGATGGCTACCTTTTTTCTTTCAAACGGTTCAAGTGGCTGATGGAGTTCTCCATGGACCGTGATTGGTGTGCTGTTGTCAAGAAACTCTTAGACATCATGCTTGATGGTACTGTGGGTGCAGGAGAGTACCCTTCCTTGAAGCTTGCATTCATGGAGATGGGTCTTCTTCACAGAGCTGTACGAAGAAATTCTAGGCCTCTGGTGGAACTCCTGTTGAGATACGTCCCTGAGAGAGGAGGCCGTGCAAGCTTCTTGCTTAGGCCTGATGTGGTAGGACCTGCTGGTTTGACACCTCTCCACATTGCAGCTGGTAGGGATGGTTCCGAAGATGTATTGGATGCATTGACTGATGATCCTGGAATGGTGGGAGTTGAAGCATGGAAGAGTGCTCGTGACAGCACAGGTTTCACTCCTGAAGATTATGCTCGTTTACGAGGGCACTACTCATACATCCACCTGGTCCAGAAGAAGATCAACAGAAGACTAGGAAATGGGCATGTGGTAGTTGACCAGTGCAAGCGTTGCAATCACAAGGTGGCTTATGGAAATGCCAGCAGATCTCTGTTATACAGGCCTGCAATGCTTTCAATGGTGGCCATAGCTGCAGTCTGTGTCTGTGTAGCACTTCTCTTTAAAAGCTCACCTGAAGTTCTATACGTGTTTACTCCCTTCCGGTGGGAATTGTTGGACTATGGCACAAGCTGA 2583 45.18 MEAKIGGEAHHFYGIGTSDLRVVGKRSSEWDSNEWKWDGDLFIASPMNPVPSDYTSQQFFPHGSAIPKRKRELEKRRRVIVVQDDNDETGTLSLKLGGHGHSVSEREVGNWEGTSGKKTKLAGVSSSRAVCQVEDCGADLSKAKDYHRRHKVCEMHSKAGCALVGNDMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDAAGNGNSLNDDQASGYLLISLLRILSNMHSNDKSDQTKDQDLLSHLLRSLASYGGTNGSRNISGLLQESQLLNDGISVGNTEVVSALLPNGVHADEARVGNMQMTSWQIKLNNFDLNDIYIDSDDGMEDLERSPVPENLGTGSLECPSWVQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDIESYIRPGCIVLTIYLRLPESTWEELCCDLGSSLSRLLDVSNDTFWRTGWVYIRVQHQIAFIYNGQVVVDMSLPLKTNNYSKILSIKPIAISMSEEAQFLVKGFNLSRPATRLLCALEGKYLVKEATHELMDDIDSVKEHDELQYLNFSCSIPKMTGRGFIEVEDHGLSSSFFPIIVAEKDVCSEICMLESTIEMTDIDEDGYLFSFKRFKWLMEFSMDRDWCAVVKKLLDIMLDGTVGAGEYPSLKLAFMEMGLLHRAVRRNSRPLVELLLRYVPERGGRASFLLRPDVVGPAGLTPLHIAAGRDGSEDVLDALTDDPGMVGVEAWKSARDSTGFTPEDYARLRGHYSYIHLVQKKINRRLGNGHVVVDQCKRCNHKVAYGNASRSLLYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFTPFRWELLDYGTS* 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4628141 4637596 - Vvi7g464 Vvi7g464 789330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g464 860 MobiDBLite consensus disorder prediction 91 116 - -
Vvi7g464 860 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 16 306 IPR044817 GO:0003677
Vvi7g464 860 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 311 627 IPR044817 GO:0003677
Vvi7g464 860 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 797 859 IPR044817 GO:0003677
Vvi7g464 860 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 629 796 IPR044817 GO:0003677
Vvi7g464 860 MobiDBLite consensus disorder prediction 335 391 - -
Vvi7g464 860 Pfam SBP domain 131 204 IPR004333 GO:0003677
Vvi7g464 860 MobiDBLite consensus disorder prediction 195 216 - -
Vvi7g464 860 ProSiteProfiles Zinc finger SBP-type profile. 128 205 IPR004333 GO:0003677
Vvi7g464 860 MobiDBLite consensus disorder prediction 352 391 - -
Vvi7g464 860 SUPERFAMILY SBT domain 129 210 IPR036893 GO:0003677|GO:0005634
Vvi7g464 860 SUPERFAMILY Ankyrin repeat 282 780 IPR036770 -
Vvi7g464 860 Gene3D - 653 788 IPR036770 -
Vvi7g464 860 Gene3D - 122 192 IPR036893 GO:0003677|GO:0005634
Vvi7g464 860 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 311 627 - -
Vvi7g464 860 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 797 859 - -
Vvi7g464 860 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 629 796 - -
Vvi7g464 860 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 16 306 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g179 Vvi7g464 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15037 PF03110 SBP 1.10E-28 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g464 - - vvi:100258912 1617.82