Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g476 ATGAGGGCGGTTCAGCTTTCCACTGATCACAGCACAAGTATTGAAGAGGAAGTATTGAGGATAAAAGCAGAACATGTTGATGACAATCAAGCCATTTTGAATGATAGAGTGAAAGGGCAGTTAAAAGTCACCAGAGCATTTGGTGCAGGGTTTCTTAAGGAGCCAAAATGCAATGAAGCTCTTCTGGAGATGTTTCAGATTGATTATGTGGGAACCACTCCATATGTCAGTTGCATCCCTTCAGTCCTTCATCACCGACTCTCTTCAAGTGATCGATTCTTGGTACTCTCCTCTGATGGGCTTTACCAGTACTTCAGCAATGAAGAGGTTGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCAGAAGGTGATCCTGCACAATACCTCATTGCGGAGCTTCTCTTTCGTGCTGCAAAAAAGAATGGAATGGATTTCCATGAATTGCTTGATATTCCCCATGGAGATAGACGTAAATATCATGACGACGTTTCTGTTATGGTGGTTTCCCTCGAGGGAAGGATCTGGAGATCATCAGGATAG 543 43.65 MRAVQLSTDHSTSIEEEVLRIKAEHVDDNQAILNDRVKGQLKVTRAFGAGFLKEPKCNEALLEMFQIDYVGTTPYVSCIPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4745187 4750345 - Vvi7g476 Vvi7g476 789342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g476 180 Pfam Protein phosphatase 2C 4 142 IPR001932 -
Vvi7g476 180 PANTHER PROTEIN PHOSPHATASE 2C 32 1 180 - -
Vvi7g476 180 CDD PP2Cc 2 171 IPR001932 -
Vvi7g476 180 SUPERFAMILY PP2C-like 3 172 IPR036457 -
Vvi7g476 180 SMART PP2C_4 1 169 IPR001932 -
Vvi7g476 180 Gene3D - 1 177 IPR036457 -
Vvi7g476 180 ProSiteProfiles PPM-type phosphatase domain profile. 1 171 IPR001932 -
Vvi7g476 180 PANTHER PROTEIN PHOSPHATASE 2C 1 180 IPR015655 GO:0004722|GO:0006470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g476 - - vvi:100262441 365.155