Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g477 ATGGGGAATAGCACTTCTCGAGTTGTCGGGTGCTTTGTGCCCTTCAATGGAAAAGGTGGTGTTGACTTAGACTTACTGGAGCCACTGGATGAAGGACTAGGCCATTCCTTCTGTTATGTTAGACCCATGATTCTCGACTCTCCTGCTATTACCCCATCAAACTCTGAGAGGTTTACTTGTTTCCCAGAAACCACATTTAAAGCCATTTCAGGGGCATCAGTGAGTGCCAATGTTTCTACGGCTCGAACTGGAAACTCCAATGCATTGTTTACAAGTGATGCCCAAGAACCTGCTGCATCATTTGAAAGCACATCCTCATTTGCTGCAATACCTTTGCAGCCAGTACCTCGTGGGTCTGGACCTCTGAATGGATTTATGTCTGGTCCTCTCGAGAGAGGAGTAATGTCGGGTCCTTTGGATGCTACGGACAAATCCAACTTCTCGGCACCGCTTGCACATGGTCGTAGAAGGCCAGGCCTCCAACGATTGATGAGGAGTGTGAGTGGGCCAATGAAAAGCACCCTGTCCCGAACCTTCTCTAGACATTCAATTGGATCCAGTTGGATGCAACGGAAAACTCACAATTTGCAATGGGCTCATGGCAAGGCTGGTGAGGATAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGATGGTTGTTTATTGGAATATATGATGGTTTTAGTGGCCCAGATGCACCGGATTTTTTGATGAGCCATCTGTATAAAGCTATAGACAAAGAATTGGAAGGACTGCTTTGGGATTATGAGGAAAAGTCTGTGAATGATCTGCTGAATCTTGAACTCCCCATGAATAGGGATGCTACAAATCATGCAACCCAGGAACTATCAGGGATCACTGCTCTAACTCCTGGTGTCTTGGGTGTAGAATCCATTGCTGCGCCAACTGCAAACTTAACTGGTCAAGGGAGGAAAAGCAAGCGACTTTATGAACTACTTCAGATGGAATCATGGGATGGAGAAAGTTCACTTTCAGTTTCTGAGGGCGGAAACCAAAGAAGGGCCAGTACTGTGAAGATCCCACCACTTCAGGAGAAAATGGCGGGATCAGGATGGAATCTAATAGCGTTCTAG 1092 46.43 MGNSTSRVVGCFVPFNGKGGVDLDLLEPLDEGLGHSFCYVRPMILDSPAITPSNSERFTCFPETTFKAISGASVSANVSTARTGNSNALFTSDAQEPAASFESTSSFAAIPLQPVPRGSGPLNGFMSGPLERGVMSGPLDATDKSNFSAPLAHGRRRPGLQRLMRSVSGPMKSTLSRTFSRHSIGSSWMQRKTHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKAIDKELEGLLWDYEEKSVNDLLNLELPMNRDATNHATQELSGITALTPGVLGVESIAAPTANLTGQGRKSKRLYELLQMESWDGESSLSVSEGGNQRRASTVKIPPLQEKMAGSGWNLIAF* 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4750473 4752712 - Vvi7g477 Vvi7g477 789343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g477 363 Gene3D - 172 316 IPR036457 -
Vvi7g477 363 PANTHER PROTEIN PHOSPHATASE 2C 32 192 277 - -
Vvi7g477 363 PANTHER PROTEIN PHOSPHATASE 2C 32 61 128 - -
Vvi7g477 363 PANTHER PROTEIN PHOSPHATASE 2C 32 11 59 - -
Vvi7g477 363 PANTHER PROTEIN PHOSPHATASE 2C 32 146 191 - -
Vvi7g477 363 SUPERFAMILY PP2C-like 201 284 IPR036457 -
Vvi7g477 363 PANTHER PROTEIN PHOSPHATASE 2C 146 191 IPR015655 GO:0004722|GO:0006470
Vvi7g477 363 PANTHER PROTEIN PHOSPHATASE 2C 61 128 IPR015655 GO:0004722|GO:0006470
Vvi7g477 363 PANTHER PROTEIN PHOSPHATASE 2C 11 59 IPR015655 GO:0004722|GO:0006470
Vvi7g477 363 PANTHER PROTEIN PHOSPHATASE 2C 192 277 IPR015655 GO:0004722|GO:0006470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g477 - - vvi:100262441 579.326