Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g482 ATGGTGGACCTCACTCTCATTCCAGGAGCTGCTGCTAGAGGAGCTGTTTGTTTGGATGGAACTCTACCTGGTTACCATTTCCATCCCGGTTTTGGATCAGGTGCCAACAGCTGGCTCATTCAATTGGAGGGTGGGGGTTGGTGTAACAACATAAAATCTTGTGTTTTTCGCAAAACAACTCGCCGGGGTTCATCCAAATACATGGAAAAGACATTAGCCTTCACGGGAATACTAAGCAATAAAGCTGAAGAAAATCCTGATTTTTTCAACTGGAACAGAGTCAAACTTAGGTACTGTGATGGCGCATCTTTTAGTGGGGAAGGTCAAAATAAGGCCACTGGACTTTATTTTCGAGGACAACGGATCTTTGAAGCTGGTATGGAGGAGCTAATGTCGAAGGGGATGAAGAATGCTGATCAGGCTCTTCTTTCTGGATGCTCTGCTGGGGGACTGGCGTCTATACTACATTGCGATGAGTTTGGCGATTTATTTCCTAAAACTACAAAAGTGAAATGCCTGAGTGATGCAGGGTTCTTCCTTGATGCAACCGATGCAGCTGGTGGGCACACCATGAGGAATTTGTATGCTGGTGTAGTTAGCTTACAGGGAGTAGAGAAGAACCTGCCAAGCACTTGTACCACCCGTTTAGATCCAACTTCGTGCTTCTTCCCTGAGAACTTGATCGACAACATTAAGACTCCACTCTTTCTTCTCAATGCAGCCTATGATGCATGGCAGTTTCAGGAAAGTTTAGTTCCATCAAGTGCTGATCCCCATGGTGAATGGAAGGGATGCAAATTAAATCATGTCAATTGTAATTCAACACAGATCCAGTTTCTCCAAGATTTCAGGATGGAAATGCTTGATGATGTCAAAGGTTTTGCAAGGGATGATCAAAATGGGCTCTTCATAAATTCGTGCTTTGCTCACTGCCAGACTGAGTTACAGGATACATGGTTTGCTGATGACTCTCCTTTTCTTGGAAAAAGGAAGATTGCAGAGTCTGTTGGAGACTGGTATTTCGATCGAAGACCCGTCAAAGCCATCGACTGTCCATACCCCTGTGACAACACCTGCCACAACCTGGTCTTCAAGTGA 1098 44.9 MVDLTLIPGAAARGAVCLDGTLPGYHFHPGFGSGANSWLIQLEGGGWCNNIKSCVFRKTTRRGSSKYMEKTLAFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGEGQNKATGLYFRGQRIFEAGMEELMSKGMKNADQALLSGCSAGGLASILHCDEFGDLFPKTTKVKCLSDAGFFLDATDAAGGHTMRNLYAGVVSLQGVEKNLPSTCTTRLDPTSCFFPENLIDNIKTPLFLLNAAYDAWQFQESLVPSSADPHGEWKGCKLNHVNCNSTQIQFLQDFRMEMLDDVKGFARDDQNGLFINSCFAHCQTELQDTWFADDSPFLGKRKIAESVGDWYFDRRPVKAIDCPYPCDNTCHNLVFK* 366
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 4796671 4800138 + Vvi7g482 Vvi7g482 789348
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g482 365 Pfam Pectinacetylesterase 1 344 IPR004963 GO:0016787
Vvi7g482 365 PANTHER PECTIN ACETYLESTERASE 3 1 364 - -
Vvi7g482 365 SUPERFAMILY alpha/beta-Hydrolases 112 245 IPR029058 -
Vvi7g482 365 PANTHER NOTUM-RELATED 1 364 IPR004963 GO:0016787
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Vvi5g286 Vvi7g482 ECH
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g482 K19882 - vvi:100252196 773.852