Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g483 ATGGCTGTAAGGTGGGGCGGAGTCTTCAAGAGTGGGGGGACACCGGCTACCACACAAAGAATCCAATCAATGATGTATCTGTCGGTCATCCAACTTTTTGTGGTTAAAATCTTTAGAATTTATCAATGGGTAGAACCTTTTTGGTATGAACAGTTTATAAGTCTAAGCATAGATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGGTTTATATTTTTAATTTCATGGTATGGATATTAGCAAGAATTTTTCTTGCAGCTCGTCTTTTTTCTTTTTTCATAGCCTTGGCATTTCATAGAAAAATGAAGATGTCGGTTATGGCGGTGGGGGTGGTAACAGTGGCGTGGTGTTTGTTTTTTATGGATAGGTATGTCTTGGGGGAAGATGATTTTCAAGGTTTGTTGGATTTGGAGGAGACTCCCTCCCCAAATCCTCTCATGGTGGACCTCACTCTCATTCCAGGAGCTGCTGCTAAAGGAGCTGTTTGTTTGGATGGAACTCTACCTGGTTATCATTTCCATCCGGGTTTTGGATCAGGTGCCAACAGCTGGCTCATTCAATTGGAGGGTGGGGGTTGGTGTAATGACATAAAATCTTGTGTTTTTCGCAAAGCAACTCGCCGGGGTTCATCCAAATACATGGAAAAGACATTAGCCTTCACGGGAATACTAAGCAATAAAGCTGAAGAAAATCCTGATTTTTTCAACTGGAACAGAGTCGAACTTAGGTACTGTGATGGCGCATCTTTTAGTGGGGAAGGTCAAAATGAGGCTGCTGGACTTTACTTCCGAGGACAACGGATCTTTGAAGCTGGTATGGAGGAGTTAATGTCAAAGGGGATGAAGAATGCTGATCAGGCTCTTCTTTCTGGATGCTCTGCTGGGGGGCTGGCGTCTATACTACATTGCGATGAGTTTGGCGGTTTATTTCCTGAAACTACAAAAGTGAAATGCCTGAGTGATGCAGGGTTCTTCCTTGATGTAACCGATGCAGCTGGTGGGCACACCATAAGGAATTTTTATGCTGGTGTAGTTAGCTTACAGGGAGTAGAAAAGAACCTGCCAAGCACTTGTATCAGCCGTTTCGATCCAACTTCGTGCTTCTTCCCTGAGAACTTGGTCGACAACATTAAGACCCCGCTCTTTCTGCTCAATGCAGCCTACGATACATGGCAGTTTCATCAAAGTTTAGTTCCATCAAGTGTTGATCCCCATGGTGAATGGAATGCATGCAAATCAAATCAATCCAATTGTAATTCAACACAGATCCAGCTTCTCCAAGATTTCAGGATGGAAATGCTTGATGATGTCAAAAGTTTTGCAAGGGATGATCAGAATGGACTCTTCATAAATTCGTGCTTTGTTCATTGCCAGACTGAGAGACAGGATACATGGTTTGCTGATGACTCTCCCCTTATTGGAAAAAAGAAGATTGCAGAGTCTGTTGGAGACTGGTATTTCGATCGAAGACCCGTCAAAGCCATCGACTGTCCATACCCCTGTGACACCACCTGCCACAACCTGGTCTTCAAGTGA 1536 43.68 MAVRWGGVFKSGGTPATTQRIQSMMYLSVIQLFVVKIFRIYQWVEPFWYEQFISLSIDVLIWTSCLGYWVYIFNFMVWILARIFLAARLFSFFIALAFHRKMKMSVMAVGVVTVAWCLFFMDRYVLGEDDFQGLLDLEETPSPNPLMVDLTLIPGAAAKGAVCLDGTLPGYHFHPGFGSGANSWLIQLEGGGWCNDIKSCVFRKATRRGSSKYMEKTLAFTGILSNKAEENPDFFNWNRVELRYCDGASFSGEGQNEAAGLYFRGQRIFEAGMEELMSKGMKNADQALLSGCSAGGLASILHCDEFGGLFPETTKVKCLSDAGFFLDVTDAAGGHTIRNFYAGVVSLQGVEKNLPSTCISRFDPTSCFFPENLVDNIKTPLFLLNAAYDTWQFHQSLVPSSVDPHGEWNACKSNQSNCNSTQIQLLQDFRMEMLDDVKSFARDDQNGLFINSCFVHCQTERQDTWFADDSPLIGKKKIAESVGDWYFDRRPVKAIDCPYPCDTTCHNLVFK* 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4800192 4811282 + Vvi7g483 Vvi7g483 789349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g483 511 SUPERFAMILY alpha/beta-Hydrolases 167 391 IPR029058 -
Vvi7g483 511 PANTHER NOTUM-RELATED 109 510 IPR004963 GO:0016787
Vvi7g483 511 Pfam Pectinacetylesterase 144 490 IPR004963 GO:0016787
Vvi7g483 511 PANTHER PECTIN ACETYLESTERASE 3 109 510 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g483 K19882 - vvi:100247073 862.833