Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g488 ATGGGCTGTCTAGCCATTGCCTTGGTTTCTTTCACAGTTATTTTTATTTCCATAATTTGGCAGATTTGCAGGATTCTGTTTTGGAGGCCTTATGTAGTGACTAGATGCTTTCGGAAACAAGGAATCAGAGGGCCTCCTTACTCAGTCCTTTCGGGCTCTCTGCATGAAATCGAGAGGCTGAAGAATGCAGCAAGAGGGAGCGTTCTGGAAACAAGTTCAAATGATATTATTCAGAGGGTTGTTCCTCACTACCATAGATGGTCCTTAGACTATGGAGATACGTTTCTGTATTGGTTTGGAACACAGCCAAGGATCTGCATTTCTGATCCAGAACTGGCCAAACACATCCTATCAAACAAATTTGGTTGCTTCATTAAACCCATGACAAGGCCTCTGCTAGAAAAAATGGCAGGGAGGGGACTAGGCCTGGTTAATGGAGCTGACTGGGTTAAACACAGGAGGATCACCAGTCCTGCCTTCACCTCAGGCAAGCTCAAGGTTATGATGAAGAGGATGGCAGAATGTACATTATCCATGCTTCATGAGTGGAAAAATCAGAGTTTTGTAGCTCATAACCAATGCAAGATGATAGAAGTGAATGGAGAATTTAGAAAGTTAACAGCTGATATAATTGCCCAGACTGCTTTTGGCACTAGCTATGTCCAAGGGAGGGAGGTCTTCGAGGCACAAAGAGAACTCCGCCAGTGTTGCAGAGCTTCCATTGCAGATATTCTGATCCCTTGGAGCCTATACCTTCCTACCCCAGAAAATCTTGGTATATGGAAGACAGAGAGGAGACTGAACAAGGCATTGAGGTCAATCATAGAGAGCAGATTGAATTCCCAGGTTTCCAGAAGCTCAGATTCAGTCCATGGAGATGATCTACTCGGGCTGATGATCGGAGAATCGGAAGCTGCTAAAACAAAACCAGGCCTCAAGTTGAGTATGAATGAGATCATAGAAGAATGCAAAATGTTCTTCTTTGCAGGGCAAGATACCACTTCCACTTTGCTAAGTTGGACTGTGTTCCTGTTAAGCTCACACCAAGAATGGCAGGACCGCCTCAGGCAAGAGGTGTTGAAGGAATGTAGGATGGGAATTCCTGATTCAGACATGCTGGCCAAGTTGAAACTGGTGAACATGGTTTTTTTGGAAGTTCTGAGACTGTATAGCCCAGTGATAACAACATTCAGGAAAGCATCCAAAGACATAAAATTTGGGAACCTGATAATCCCAAGAGATACATGCATATCTATTCCAGTAGTGAAGATACATCGGATGGAGAAATACTGGGGAGAAGATGCAAATGAGTTCAATCCTTTGAGGTTCTCTAATGGAGTCTCTGAAGCTGCAAAACACCCAAATGCACTAATTGCCTTTGGAATGGGCCCAAGAGCTTGTATTGGCAAAAAATTTGCAATGTTGGAGGCAAAAATAGTGATTGTCTTGATGCTTCAGAGGTTTTCTTTTTTCCTCTCCCCTGACTATAAACACACACCAATGGAAAACCTCACTCTTCAGCCACAATGTGGCATCCCAATTCTGATGGAACCTTTGCTCTTATAA 1566 43.49 MGCLAIALVSFTVIFISIIWQICRILFWRPYVVTRCFRKQGIRGPPYSVLSGSLHEIERLKNAARGSVLETSSNDIIQRVVPHYHRWSLDYGDTFLYWFGTQPRICISDPELAKHILSNKFGCFIKPMTRPLLEKMAGRGLGLVNGADWVKHRRITSPAFTSGKLKVMMKRMAECTLSMLHEWKNQSFVAHNQCKMIEVNGEFRKLTADIIAQTAFGTSYVQGREVFEAQRELRQCCRASIADILIPWSLYLPTPENLGIWKTERRLNKALRSIIESRLNSQVSRSSDSVHGDDLLGLMIGESEAAKTKPGLKLSMNEIIEECKMFFFAGQDTTSTLLSWTVFLLSSHQEWQDRLRQEVLKECRMGIPDSDMLAKLKLVNMVFLEVLRLYSPVITTFRKASKDIKFGNLIIPRDTCISIPVVKIHRMEKYWGEDANEFNPLRFSNGVSEAAKHPNALIAFGMGPRACIGKKFAMLEAKIVIVLMLQRFSFFLSPDYKHTPMENLTLQPQCGIPILMEPLLL* 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4846490 4849285 - Vvi7g488 Vvi7g488 789354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g488 521 Gene3D Cytochrome P450 29 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 SUPERFAMILY Cytochrome P450 36 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PANTHER P450, PUTATIVE-RELATED 4 515 - -
Vvi7g488 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 515 - -
Vvi7g488 521 Pfam Cytochrome P450 67 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g488 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g488 K20660 - vvi:100264193 1056.2