Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g507 | ATGTGCACCATAGGCTATGGCGATATCGCTCCTCTCACCCCCGCCACCAAGGAGAACATGATTTTGACTGGCATTCAGGTGGGTGGAGCACCAGCCGGTGGCTTTTCTGCTAGGAACTATATAGTCGATGTGGAGAAGGGAAGAATGAGAATCAGATTGAAAGTTGGGTTAGCTCTAGGAGTAGTTGTACTATGCATTGGTATGGGCACAATGGTGCTGTATTTTGTGGAGAATTTAGACTGGATTGATGCTGTTTACTTGTCTGTCATGTCAGTCACCTCGGTTGGATATGGGGATAGGGCCTTCAAGACTCTGCCCGGTCGCTTGTTTGCTGCAATTTGGCTTCTCTTCTCAACCCTGGCAGTGGCTCGGGCTTTTCTGTATTTAGCAGAGGCAAGGATTGATAAGAGGCATAGGAGAATTACAAAGTGGGTGTTGCATAGGGAAATTACAGTCGAGGATTTGCTTGCGGCTGATATCAACAACAATGGTTTCATTAGTAAATCAGAATATGTCATCTACAAGCTCAAGGAGATGGGGAAGATTGCGGAAAATGATGTATTGCAGATCTGTAATCAGTTCAACAAGCTTGACCCCAACAACTCTGGAAAAATAACCCTGCCTGATCTCTTGGAGAATCACTTGTGA | 648 | 45.52 | MCTIGYGDIAPLTPATKENMILTGIQVGGAPAGGFSARNYIVDVEKGRMRIRLKVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVTSVGYGDRAFKTLPGRLFAAIWLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVEDLLAADINNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLLENHL* | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4997709 | 5000938 | + | Vvi7g507 | Vvi7g507 | 789373 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g507 | 215 | SUPERFAMILY | EF-hand | 157 | 211 | IPR011992 | - | |
Vvi7g507 | 215 | Gene3D | - | 137 | 215 | - | - | |
Vvi7g507 | 215 | Pfam | EF hand | 157 | 171 | IPR002048 | GO:0005509 | |
Vvi7g507 | 215 | Pfam | Ion channel | 62 | 130 | IPR013099 | - | |
Vvi7g507 | 215 | SUPERFAMILY | Voltage-gated potassium channels | 46 | 155 | - | - | |
Vvi7g507 | 215 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 1 | 17 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Vvi7g507 | 215 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 17 | 210 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Vvi7g507 | 215 | Gene3D | - | 36 | 136 | - | - | |
Vvi7g507 | 215 | ProSitePatterns | EF-hand calcium-binding domain. | 198 | 210 | IPR018247 | - | |
Vvi7g507 | 215 | ProSitePatterns | EF-hand calcium-binding domain. | 159 | 171 | IPR018247 | - | |
Vvi7g507 | 215 | PANTHER | TWO-PORE POTASSIUM CHANNEL 4-RELATED | 17 | 210 | - | - | |
Vvi7g507 | 215 | PANTHER | TWO-PORE POTASSIUM CHANNEL 4-RELATED | 1 | 17 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g507 | K05389 | - | vvi:100257187 | 402.905 |