Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g507 ATGTGCACCATAGGCTATGGCGATATCGCTCCTCTCACCCCCGCCACCAAGGAGAACATGATTTTGACTGGCATTCAGGTGGGTGGAGCACCAGCCGGTGGCTTTTCTGCTAGGAACTATATAGTCGATGTGGAGAAGGGAAGAATGAGAATCAGATTGAAAGTTGGGTTAGCTCTAGGAGTAGTTGTACTATGCATTGGTATGGGCACAATGGTGCTGTATTTTGTGGAGAATTTAGACTGGATTGATGCTGTTTACTTGTCTGTCATGTCAGTCACCTCGGTTGGATATGGGGATAGGGCCTTCAAGACTCTGCCCGGTCGCTTGTTTGCTGCAATTTGGCTTCTCTTCTCAACCCTGGCAGTGGCTCGGGCTTTTCTGTATTTAGCAGAGGCAAGGATTGATAAGAGGCATAGGAGAATTACAAAGTGGGTGTTGCATAGGGAAATTACAGTCGAGGATTTGCTTGCGGCTGATATCAACAACAATGGTTTCATTAGTAAATCAGAATATGTCATCTACAAGCTCAAGGAGATGGGGAAGATTGCGGAAAATGATGTATTGCAGATCTGTAATCAGTTCAACAAGCTTGACCCCAACAACTCTGGAAAAATAACCCTGCCTGATCTCTTGGAGAATCACTTGTGA 648 45.52 MCTIGYGDIAPLTPATKENMILTGIQVGGAPAGGFSARNYIVDVEKGRMRIRLKVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVTSVGYGDRAFKTLPGRLFAAIWLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVEDLLAADINNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLLENHL* 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4997709 5000938 + Vvi7g507 Vvi7g507 789373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g507 215 SUPERFAMILY EF-hand 157 211 IPR011992 -
Vvi7g507 215 Gene3D - 137 215 - -
Vvi7g507 215 Pfam EF hand 157 171 IPR002048 GO:0005509
Vvi7g507 215 Pfam Ion channel 62 130 IPR013099 -
Vvi7g507 215 SUPERFAMILY Voltage-gated potassium channels 46 155 - -
Vvi7g507 215 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 1 17 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vvi7g507 215 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 17 210 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vvi7g507 215 Gene3D - 36 136 - -
Vvi7g507 215 ProSitePatterns EF-hand calcium-binding domain. 198 210 IPR018247 -
Vvi7g507 215 ProSitePatterns EF-hand calcium-binding domain. 159 171 IPR018247 -
Vvi7g507 215 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 17 210 - -
Vvi7g507 215 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 1 17 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g507 K05389 - vvi:100257187 402.905