Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g513 ATGTACGGAGATGGGCCCAGGAAGACCATTGTCACTGGAACCAAAAGCTACCGCGACGGAATCACCACTTACAAGACTGCCACATTCTCGGCCATTGGAAAGGGGTTTGTTGCGAGGTCGATGGGATTCGTCAACACCGCAGGTCCTGACGGGCACCAGGCTGTTGCTCTCCGCGTCCAATCAGATATGTCAGCAATCTTCAACTGCAGAATGGACGGGTACCAAGACACCTTGTACATCCAGGCCCATCGCCAGTTCTACCGCAATTGTGTCATCTCGGGCACCATAGACTTCATCTTCGGTGACTCGACGACTGTGATCCAGAACTCCTTGATCATAGTAAGAAGGCCAAAGGACAACCAACAAAACACAGTGACTGCACACGGAAAAGCTGAAAAGCGTGAAACCACTGGATTGGTGATCCACAATTGCAGAATCGTCCCAGAGCAAAAACTGTTCCCTGACAGGTTCAAGATCCCTTCATTCTTGGGTCGTCCATGGAAGCCGTACTCAAAGACGATTATAATGGAGACGACCTTGGGAGATTTCATCCAACCAGCCGGGTGGATGCCGTGGGCTGGGGACTTTGCCCTGAACACACTCTTCTACGCTGAGTATGGGAACCGCGGCCCTGGTGCAAACACCCGCAGCAGGGTGACATGGAAGGGTTACAGGATCATCAAGACCAGGAACGAGGCTCTTCAGTACACGGTCAACTCATTCATTCAGGGAAACCTCTGGCTGAAACAAATTAATATCCCTTATCTGCCAAGCCTCAAACGTTAA 786 51.15 MYGDGPRKTIVTGTKSYRDGITTYKTATFSAIGKGFVARSMGFVNTAGPDGHQAVALRVQSDMSAIFNCRMDGYQDTLYIQAHRQFYRNCVISGTIDFIFGDSTTVIQNSLIIVRRPKDNQQNTVTAHGKAEKRETTGLVIHNCRIVPEQKLFPDRFKIPSFLGRPWKPYSKTIIMETTLGDFIQPAGWMPWAGDFALNTLFYAEYGNRGPGANTRSRVTWKGYRIIKTRNEALQYTVNSFIQGNLWLKQINIPYLPSLKR* 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5031264 5032609 - Vvi7g513 Vvi7g513 789379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g513 261 Gene3D - 1 259 IPR012334 -
Vvi7g513 261 Pfam Pectinesterase 1 245 IPR000070 GO:0030599|GO:0042545
Vvi7g513 261 ProSitePatterns Pectinesterase signature 2. 92 101 IPR033131 -
Vvi7g513 261 PANTHER PECTINESTERASE 1 257 - -
Vvi7g513 261 SUPERFAMILY Pectin lyase-like 1 256 IPR011050 -
Vvi7g513 261 PANTHER PECTINESTERASE 4-RELATED 1 257 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g259 Vvi7g513 ECH
Vvi7g513 Vvi14g31 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g513 K01051 - vvi:100245002 541.576