Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g552 ATGGGCCGGAAGCGGGTCTATGGCATGACTCTTATGCTCATGAAGACTCGTGGTGCCTTCATTGCTGCTGTCTTTGCCATGCAAGGCTTTGGGATTTTGGCTGGCGGTTTGTTTGCAATTATAGCTGATTATGTTTGGAGGATCATTCTAATGGTTGGAGCACTTCCTGCTGCCCTCACTTATTACTCGAGGACGAAAATGCCAGAAACTGCTAGATACACTGCTCTGGTTGCTAAGAATGCTAAAAAGGCTGCTTCAGATATGTCAAAGGTTTTGCAGGTGGACATTGAGGCAGAACCTCAAAAGGTTGAGGAGGTGACCAAAGCGTATGGTTTATTCTCCAAGGAGTTTGTTCGTCGCCATGGGGTTCACTTGTTCGGGACTGCAAGCACATGGTTCTTGCTTGACATTGCATTCTACAGTCAAAATCTGTTCCAGAAGGACATCTTCAGCGCAATTGGGTGGATTCCTCCAGCAAAGACTATGAATGCCATTGATGAAGTATACAAAATTGCAAAGGCGCAAACGCTTATTGCTCTATGCAGTACTGTCCCAGGGTACTGGTTTACAGTGGCTTTCATCGACCGTATGGGAAGATTTGCTATTCAGTTGATGGGCTTCTTCTTCATGACAGTGTTCATGTTTGCACTGGCCCTTCCGTACGACCACTGGACTCGTAAGGACAACAGAATCGGGTTCGTGGTAATGTACTCATTGACCTTCTTCTTTGCAAATTTTGGACCGAATGCCACTACATTTGTGGTGCCAGCTGAGATCTTCCCAGCAAGGTTCAGGTCAACATGCCACGGCATATCAGCAGCATCTGGGAAGGCTGGGGCAATTGTGGGTGCATTTGGGTTCTTGTATTTGGCTCAGAGCATAGGTGTGAAGAATGCACTCCTTGTATTGGGTGGTATCAACCTTTTAGGATTCATCTTCACCTTCATGGTGCCTGAGTCAAAAGGAAAATCATTGGAAGAGATGTCTGGCGAGACTGAGGATAATAATGAGCAAGCAAATGCCAGTGTCCCTTCAACAGAGAGGTGGATGCCATAG 1056 46.5 MGRKRVYGMTLMLMKTRGAFIAAVFAMQGFGILAGGLFAIIADYVWRIILMVGALPAALTYYSRTKMPETARYTALVAKNAKKAASDMSKVLQVDIEAEPQKVEEVTKAYGLFSKEFVRRHGVHLFGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIDEVYKIAKAQTLIALCSTVPGYWFTVAFIDRMGRFAIQLMGFFFMTVFMFALALPYDHWTRKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISAASGKAGAIVGAFGFLYLAQSIGVKNALLVLGGINLLGFIFTFMVPESKGKSLEEMSGETEDNNEQANASVPSTERWMP* 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6142756 6144597 + Vvi7g552 Vvi7g552 789418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g552 351 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 15 41 - -
Vvi7g552 351 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 42 341 - -
Vvi7g552 351 SUPERFAMILY MFS general substrate transporter 15 329 IPR036259 -
Vvi7g552 351 Gene3D MFS general substrate transporter like domains 14 345 IPR036259 -
Vvi7g552 351 MobiDBLite consensus disorder prediction 324 351 - -
Vvi7g552 351 Pfam Sugar (and other) transporter 15 329 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vvi7g552 351 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 322 IPR020846 GO:0022857
Vvi7g552 351 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 15 41 - -
Vvi7g552 351 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 42 341 - -
Vvi7g552 351 CDD MFS_PhT 2 321 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g701 Vvi7g552 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g552 K08176 - vvi:100232948 623.624