Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g614 | ATGGCAGGCCTTGTTGCAGGTTCCCATACCCGAAATGAGATGCATGTTTTGCATGGCGAGCAACGGCCTCCCACCCGCCAGTCTGTACCCAAACTATGTCGTGTTTGTGGCGATGAGATCGGAGTTAAAGCGGATGGTGAGTTGTTTGTAGCCTGCCATGAGTGTGGGTTCCCAGTTTGCAAGCCTTGTTATGAGTATGAAAGGAGTGAAGGAAACCAGTGCTGTCCCCAGTGTAACACTCGCTATAAGCGTCACAAAGGTTGCGCTAGAGTTGCAGGAGATGATGAAGGCAGCTTGGATGGAGATGATTTCAATGATGAATTTCAGATTAAGAACACGCGAGATCAGCAGAATGTCTTTGCTCCTTCGGAAAATGGAGACTATAATCCGCAGCAATGGCATGCAAATGGCCAAGCCTTCTCTGCAGCAGGGAGTGTTGCTGGAAAGGATTTTGAAGGTGAGAAAGATATTTACAACAATGATGAATGGAAAGACAGGGTAGAGAAATGGAAAACCAGGCAAGAAAAGAAAGGTTTAATTAGCAAAGATGGAGGAAATGATCCAGGCGATGATGATGACTTCCTTCTGGCTGAGGCCCGGCAACCATTGTGGAGAAAAGTCCCAATCGCATCAAGCAAAATCAGCCCATATCGCATAGTCATCGTCCTCCGTCTAGTCATTCTTGCTTTCTTCTTCCGTTTCCGCATCTTAACCCCAGCTTATGATGCTTTTCCCTTGTGGCTCATCTCTGTCATTTGTGAGATCTGGTTCGCTTTCTCTTGGATACTTGACCAGTTCCCCAAATGGCAACCCATCAACCGTGAAACCTACCTGGAACGCCTGTCAATGAGGTTTGAGCGTGAGGGTGAGCCCAACCGTCTCTCCCCAGTTGATGTCTTTGTAAGTACTGTGGACCCTCTTAAGGAACCACCAATCATAACTGCAAACACAGTTCTATCCATCTTGTCCCTTGATTATCCGGTCGAGAAGGTGAGTTGTTATGTATCGGATGATGGCGCATCCATGCTTCTTTTCGATTCTCTAGCAGAAACTGCTGAGTTTGCAAGGAGATGGGTGCCATTCTGCAAGAAGCATAGCATTGAGCCCAGGGCTCCTGAGTTCTACTTCTCTCAGAAAATTGACTACTTGAAAGATAAAGTGGACCCCAGCTTTGTGAAGGAGCGCAGAGCCATGAAAAGAGAGTATGAAGAGTTCAAAGTGAGGATTAACGCATTGGTAGCAAAGGCTCAAAAGAAACCAGAAGAAGGATGGACCATGCAGGATGGCACCCCATGGCCTGGAAACATCACTCGCGATCATCCCGGGATGATTCAGGTTTACCTTGGTAGTGAAGGTGCACTTGATGTAGAAGGTAAGGAGCTGCCACGGCTCGTGTATGTTTCTCGTGAGAAACGACCTGGCTATCAGCACCACAAGAAAGCTGGTGCCATGAATGCTCTGATTCGAGTCTCTGCAGTGCTTACCAATGCACCCTTTATGTTGAATTTGGATTGTGATCACTACATCAACAACAGCAAGGCTGCAAGAGAAGCCATGTGCTTTCTGATGGATCCACAGCTTGGGAAGAAGCTCTGTTATGTCCAGTTCCCACAGAGGTTCGATGGTATTGATCTCCACGATCGATATGCTAACCGAAATGTTGTATTCTTTGATATCAACATGAAAGGCCTAGATGGGATTCAAGGGCCGGTGTATGTTGGTACTGGATGTGTCTTCAACCGGCAGGCATTGTATGGCTATGATCCACCATCAAAGTCGAAGAAGAAAAAGAAAATGATGGGGAAGAACTACTCCAGGAAAGGATCTGGACCAGTCTTTGATCTTGAAGAGATTGAAGAAGGCCTTGAAGGCTATGATGAGTTGGAGAAATCATCCCTTATGTCACAGAAAAACTTTGAGAAACGGTTTGGACAGTCTCCAGTTTTCATTACTTCCACTCTCATGGAAGATGGTGGCCTTCCTGAAGGGACTAATAGCACAGCTCTTATCAAAGAAGCCATCCATGTTATCAGTTGCGGCTATGAAGAAAAAACCGAATGGGGCAAAGAGATTGGATGGATTTATGGTTCAGTTACAGAAGACATTTTGACAGGATTCAAGATGCATTGTAGAGGGTGGAAGTCAGTGTATTGTATGCCAAAGAGAGCGGCTTTCAAGGGATCTGCTCCTATAAATCTATCAGACCGGTTGCACCAAGTTTTGAGATGGGCTCTTGGATCTGTTGAAATTTTCCTTAGTCGTCACTGTCCTCTATGGTATGGTTATGGAGGAAAGTTGAAATGGCTGGAGAGGCTTGCTTACATTAACACCATTGTTTATCCCTTCACTTCCATTCCCTTGCTTGCCTACTGTACCATTCCTGCAGTCTGTCTTCTCACAGGAAAATTCATCATCCCAACTCTGACAAACTTTGCTAGCGTATGGTTTATGGCTCTTTTCCTCTCCATCATAGTAACAGGTGTGCTTGAGCTCCGATGGAGTGGTGTTAGCATCCAGGACTGGTGGCGCAATGAACAATTCTGGGTGATTGGTGGTGTCTCAGCTCACCTTTTCGCCGTTTTCCAGGGCCTCCTCAAGGTTCTTGCTGGAGTTGATACCAACTTCACTGTAACATCAAAAGCAGCAGATGATGCTGAGTTTGGAGACCTCTACCTCTTCAAATGGACTACCCTTCTCATCCCACCAACCACTCTTATAATCCTGAATATGGTTGGAGTTGTAGCTGGAGTTTCAGATGCCATCAACAATGGTTATGGTTCATGGGGACCTTTATTTGGGAAACTATTTTTTGCCTTCTGGGTCATTGTCCATCTCTATCCATTCCTCAAGGGTTTGATGGGAAGGCAAAACAGAACTCCTACCATTGTAGTCCTTTGGTCCATCCTTCTCGCTTCGATTTTCTCACTGGTTTGGGTTCGAATTGATCCTTTCCTGCCTAAACAAACAGGCCCAGTTCTTAAACAATGTGGTGTCGAATGCTAG | 3003 | 45.85 | MAGLVAGSHTRNEMHVLHGEQRPPTRQSVPKLCRVCGDEIGVKADGELFVACHECGFPVCKPCYEYERSEGNQCCPQCNTRYKRHKGCARVAGDDEGSLDGDDFNDEFQIKNTRDQQNVFAPSENGDYNPQQWHANGQAFSAAGSVAGKDFEGEKDIYNNDEWKDRVEKWKTRQEKKGLISKDGGNDPGDDDDFLLAEARQPLWRKVPIASSKISPYRIVIVLRLVILAFFFRFRILTPAYDAFPLWLISVICEIWFAFSWILDQFPKWQPINRETYLERLSMRFEREGEPNRLSPVDVFVSTVDPLKEPPIITANTVLSILSLDYPVEKVSCYVSDDGASMLLFDSLAETAEFARRWVPFCKKHSIEPRAPEFYFSQKIDYLKDKVDPSFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWTMQDGTPWPGNITRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAAREAMCFLMDPQLGKKLCYVQFPQRFDGIDLHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPSKSKKKKKMMGKNYSRKGSGPVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFITSTLMEDGGLPEGTNSTALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNFASVWFMALFLSIIVTGVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKAADDAEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPVLKQCGVEC* | 1001 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7204657 | 7209262 | - | Vvi7g614 | Vvi7g614 | 789480 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g614 | 1000 | Coils | Coil | 395 | 415 | - | - | |
Vvi7g614 | 1000 | SUPERFAMILY | RING/U-box | 19 | 98 | - | - | |
Vvi7g614 | 1000 | CDD | mRING-HC-C4C4_CesA_plant | 31 | 81 | - | - | |
Vvi7g614 | 1000 | Pfam | Zinc-binding RING-finger | 24 | 96 | IPR027934 | - | |
Vvi7g614 | 1000 | Pfam | Cellulose synthase | 297 | 993 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Vvi7g614 | 1000 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 310 | 822 | IPR029044 | - | |
Vvi7g614 | 1000 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 18 | 107 | IPR013083 | - | |
Vvi7g614 | 1000 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Vvi7g614 | 1000 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 438 | 588 | IPR029044 | - | |
Vvi7g614 | 1000 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] | 21 | 119 | - | - | |
Vvi7g614 | 1000 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] | 153 | 1000 | - | - | |
Vvi7g614 | 1000 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 153 | 1000 | - | - | |
Vvi7g614 | 1000 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 21 | 119 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g614 | K10999 | - | gmx:100781996 | 1737.62 |