Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g62 ATGGGAAACGGTGACTACAAGTACCCGGCGACGGGAGTGGAGTGTGCCCATCGTGTGGCGGTTCCACCGCCGCAACCCTTCACGAAATCGCTCAAGACGTCTCTGAAAGAGACCTTCTTCCCCGATGACCCGCTTCGGCAATTCAAGAACCAGCCTGCTTCGAGGAAATTCATACTGGGACTTCAGTACTTTTTTCCCATCCTCGAATGGGGTCCTCGCTACAGCTTCCAGTTCTTGAAGGCCGACCTGATTTCCGGCATCACCATCGCCAGCCTCGCCATCCCTCAGGGGATCAGCTACGCCAAACTCGCCAATCTACCGCCAATTCTCGGGCTATATTCGAGCTTCGTTCCGCCGCTGGTTTATGCTATGATGGGGAGCTCCAGAGACTTGGCGGTGGGGACAGTAGCGGTTGGATCGCTTCTGATAGCTTCCATGCTGGGGAATGAAGTGAAGGCCAATGAACATCCCCAGACTTATCTTCACCTCGCTTTCCTAGCCACATTCTTTGCTGGAGTTTTTCAAGTTTCGCTTGGCCTTCTGAGGCTAGGGTTTGTGGTCGATTTTCTGTCGCATGCAACCATAGTGGGGTTCATGGGAGGAGCTGCAACAGTTGTGTGTCTGCAACAGCTGAAAGGGATTCTGGGTCTCGACCATTTCACCCATGGCACCGATATCGTCTCTGTCATGCGTTCTGTCTTCACCCAAACACACCAGTGGAGATGGGAAAGTGGAGTGCTTGGATGTTGTTTCCTTTTCTTCCTCATGCTTACAAAATACTTCAGCAAGAGGAGACCCAAGTTCTTTTGGGTATCAGCAATGGCACCATTGACGTCAGTGATATTAGGAAGTCTTCTCGTTTATCTCACCCACGCTGAGAGACACGGTGTCCAAGTGATTGGAAACTTGAAGAAAGGTCTCAATCCACCCTCCCTCAGCGACCTACCTTTTGGATCCCCGTATCTTTCGACTGCCATTAAAATCGGCATCATTATTGGCATCATCGCATTGGCAGAAGGAATAGCAGTGGGGAGAAGCTTTGCCATGTTTAAGAACTACCATATTGATGGGAACAAAGAGATGATTGCTTTTGGGATGATGAACATTGCCGGTTCTTGCACTTCTTGCTATCTCACCACTGGGCCTTTTTCGAGATCAGCAGTGAACTTCAATGCAGGGTGCAAGACAGCAGTGTCAAACATTGTGATGGCAATGGCAGTGATGATCACACTGTTGTTCCTCACACCACTGTTCCATTACACTCCCCTAGTGGTGCTGTCCTCCATTATCATAGCTGCAATGCTTGGCCTCATAGACTATGATGCAGCCATCCATCTCTGGAAGGTGGACAAATTCGACTTCATAGTCTGCATAGCCGCATACATTGGCGTGGTGTTTGGCAGCGTGGAGATCGGCCTAGTCCTAGCCGTGGCCATATCTCTTCTCAGGATGGTTCTCTTTGTGGCCAGGCCAAGGACTACGGTGCTTGGGAACATCCCCAACTCCAAGATATACAGAAGTGTTGACCAATACCCAGCTGCAAGCACAGTTCCAGGAGTTCTCATACTTGAGATTGATGCCCCCATTTACTTCGCCAATGCAGGCTACTTGAGAGAAAGGATATCGAGATGGATCGATGAGGAGGAAGACAAGCTGAAGGCAGCTGGAGAATCCAGTTTACAGTATGTTATACTTGACATGGGGGCTGTTGGTAACATCGACACAAGTGGGATTAGCATGCTTGAGGAGGTGAAGAAGAGCATGGAAAGAAGCGGGCTCAAGCTTGTACTAGCGAATCCAGGAGGGGAAGTGATGAAGAAGATGAACAAGTCCAAGTTTATAGAGGTATTAGGGCAGGAGTGGATATATCTGACAGTGGGGGAGGCTGTGGGAGCATGCAACTTCATGCTTCATACATGCAAGCCAAAAGCTATGACTGATGATTCAAGCATGGTTTGA 1959 49.52 MGNGDYKYPATGVECAHRVAVPPPQPFTKSLKTSLKETFFPDDPLRQFKNQPASRKFILGLQYFFPILEWGPRYSFQFLKADLISGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAMMGSSRDLAVGTVAVGSLLIASMLGNEVKANEHPQTYLHLAFLATFFAGVFQVSLGLLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLDHFTHGTDIVSVMRSVFTQTHQWRWESGVLGCCFLFFLMLTKYFSKRRPKFFWVSAMAPLTSVILGSLLVYLTHAERHGVQVIGNLKKGLNPPSLSDLPFGSPYLSTAIKIGIIIGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMAMAVMITLLFLTPLFHYTPLVVLSSIIIAAMLGLIDYDAAIHLWKVDKFDFIVCIAAYIGVVFGSVEIGLVLAVAISLLRMVLFVARPRTTVLGNIPNSKIYRSVDQYPAASTVPGVLILEIDAPIYFANAGYLRERISRWIDEEEDKLKAAGESSLQYVILDMGAVGNIDTSGISMLEEVKKSMERSGLKLVLANPGGEVMKKMNKSKFIEVLGQEWIYLTVGEAVGACNFMLHTCKPKAMTDDSSMV* 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 882591 888350 + Vvi7g62 Vvi7g62 788928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g62 652 Pfam Sulfate permease family 79 459 IPR011547 GO:0016021
Vvi7g62 652 Pfam STAS domain 511 629 IPR002645 -
Vvi7g62 652 SUPERFAMILY SpoIIaa-like 513 633 IPR036513 -
Vvi7g62 652 PANTHER SULFATE TRANSPORTER 13 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi7g62 652 ProSiteProfiles STAS domain profile. 510 633 IPR002645 -
Vvi7g62 652 CDD STAS_SulP_like_sulfate_transporter 511 626 - -
Vvi7g62 652 PANTHER BNAA04G05880D PROTEIN 13 647 IPR030311 GO:0008272|GO:0009507|GO:0015116
Vvi7g62 652 Gene3D STAS domain 490 635 IPR036513 -
Vvi7g62 652 TIGRFAM sulP: sulfate permease 66 629 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi7g62 652 ProSitePatterns SLC26A transporters signature. 108 129 IPR018045 GO:0008271|GO:0008272
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g546 Vvi7g62 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g62 K17471 - vvi:100852937 1275.0