Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g638 ATGGGAGGGGTGGTGGACGAAGAAGGCATAGCCAGGAAGTTCTGGATCAAGTTCCGGAACGATTCGGTTGTCGCCATGTACACTCCTTTTTTAGTGTGTTTGGCTTCTGGGAAATTGGATTCCGAAGCGTTTCTTCATTGTATCTCTCAAGATGTTCACTTCCTCAAGGCCTTTTCACAAGCGTACGAAATAGCGGATGATTGCGCGGATGATGATGAAGACAAGGACGCTATTCGGAAGATGAGGAAACTTGTGATAGAAGCCCTTAGAATGCGCGATGATGCTGTTCGAGACTGGGGCTTTGACCTACCAAAAGAGATTCCTTACAACTCTGCAACATCAAAATACACAGATTTTTTACTAGCAACTGCCTCAGGGAAAACTGCAACTCCTTTTGAGAAGACAAAAGTTGCTGCTTATACACTTGCTGCTATTGCTCCTTACATGAGGTTCTATGCATTCATAAGTAATGAGATCCAAACTCTTCTAGATCCTAATGATGGCAGTCATAAATATAAGAAGTGGATTGACAGTTACTCCTCTCAAAGTTTTGAGGCATCAGCTCTGCAAAATGAAGATCTGCTGGATAAACTAAGCATTTCTTTGACAGGCGAAGAGCTTGAAATCTTAGAAAAGGTCTACCACCAAGCTACAAAGCTTGAAGTAGATTTCTTCTATGCCCAACCAGTTGTTCAGCAAACTATAGTCCCATTGTGTCGAGTGCATGATCATGCGAAATACCACCTTACTGTATTTTGTGATTTTGACATGACATGCACTCCCATTGATTCATCTGCCCTGTTAGCGGAGATTGCAATTGTAACAGCACCAAAGATTGATCTAAATGCATCTGAAACTCAACTTGTTCGGATGTCATCAACTGATCTGAAGAACACATGGGGTGTTCTATCTACCCAGTATACTGAAGAGCTTGAAAAATGTATGGAAAGCATTGTCCCCAGTGAAACAGTGGAAAAATTCAATTATGAAGGCCTATGTAAAGCACTTGAGCAACTTTCTGATTTTGAGAAAAGGGCAAATTCAAGAGTGGTTCAGTCTGGAGTATTGAAGGGTTTAAATCTAGAGGATATAAAACGGGCTGGTCAAGGTCTAATTCTTCAAGATGGTTGCACAGGTTTCTTCCAAAAGATTCTTAAAAATGATAATCTGAAAGCAGATGTTAATGTACTTTCATACTGTTGGTGTGGCGATTTCATTAAATCAGCATTTTCATCAGGGGATCTGGGTGTTGTTAGAGTATATTCAAATGAGTTGGCTTATGAAGAATCCATTTCCACGGGTGAAATCATTAAGAAGATGGAGTCTGCCATGGAAAAGCTTCAGGCTTTTAAGGACATCTTAAAGGAGGGATGCAGTAATGACATGGAGCACTTGACAGTTTATATTGGAGGTTCAATTGGTGACTTACTTTGCCTGCTTGAGGCAGATATAGGCATTGTGATTGGTTCAAGTCTAAACCTAAGGAGACTCGGAGATCAGTTTGGTGTTTCATTTGTTCCATTGTTCTCTGGTTTGGTGAAGAAACAACAGCAACTCATTGAAGTATTGAGGATGGTGGGGAAGAACAAGATGCAGGTGCAGGCATTTCTGGTGTTGTTCTTCTTCTACTGTTGCATTGGTTGTTATGGTAGGGGGGTTGAGAAGGATGAAGTTTCGGTTTTGTTATCGATTAAGAGGGGTCTTGTTGATCCTTTGAACCAGTTGGGAGACTGGAAAGTGGAGGAAAATGGGGTTGGGAATGGTTCAGTTCACTGTAATTGGACTGGGGTGTGGTGCAACTCTAAAGGAGGTGTTGAGAGGCTTGATCTCTCTCACATGAATCTCAGTGGCCGGGTATTGGATGAGATTGAGCGCCTGCGTAGTCTCGCTCATTTGAACTTCTTTGATGTCAGTCAGAATTTCTTTGAGGGTGGCTTTCCTGTGGGGTTTGGAAGGGCACCTGGATTGACGATTCTGAATGCTTCAAGCAATAATTTCTCGGGTTTTCTTCCTGAGGATCTTGGAAACCTGACTGCACTGGAGATTCTGGATCTCAGAGGGAGTTTCTTCCAAGGCTCAATTCCGAAATCTTTCAAGAACTTGCAGAAGTTGAAGTTTCTTGGCCTTTCAGGGAATAATCTTACAGGCCAAATACCGAGGGAGATTGGGCAGCTTTCATCACTGGAGACTATCATTCTTGGGTACAATGAATTTGAAGGTGAAATCCCTGTGGAGCTTGGGAATCTCACCAATCTCAAGTATCTGGATTTGGCTGTTGGCAACCACGGCGGCAAGATTCCAGCTGCCTTGGGGAGGCTGAAGCTGCTGAACACAGTTTTCTTGTATAAAAACAATTTTGAAGGCGAGATTCCACCAGAAATTGGCAACATCACTTCACTGCAGTTGCTGGATCTCTCTGATAACCTGTTATCAGGAGAAATTCCAGCTGAGATTGCTAAATTGAAGAATTTACAGCTGTTGAATCTCATGTGCAACCAACTTTCAGGTTCAGTTCCTTCTGGGCTTGAATGGTTGCCTGAGTTGGAGGTGCTTGAGCTTTGGAACAACTCCTTGACAGGCCCTTTGCCCAATGATCTTGGTAAGAATTCACCATTGCAGTGGTTGGATGTATCCTCCAATTCATTCACTGGTGGGATCCCTCCAAGCTTGTGCAATGGAGGAAACCTGACTAAGCTCATTCTCTTCAACAATGGCTTCTCTGGTCCGATTCCAATTGGGCTATCAACATGTGCCTCATTGGTTCGAAGATTAGAGTTGGCGAATAATAGTCTCACTGGGCAAATTCCAGGGCAAATCCCAAAGACAGTTGCCACCATGCCTACATTAGCCATTCTTGATCTCTCCAACAATTCTCTAACCGGTACCATACCTGAAAACTTTGGAACTTCTCCAGCCTTAGAATCGCTTAATGTCTCATATAACAGGCTAGAGGGGCCTGTTCCAACGAACGGTGTGCTTCGAACAATAAATCCTGACGATCTCGTGGGCAATGCTGGTCTCTTTTTAGCTGTTGGGGTTGCAGTTTTTGGTGCTCGGTCTCTGTACAAGAGGTGGTATTCAAATGGAAGCTGCTTCACAGAGAGATTTGAAGTGGGCAATGGAGAATGGCCATGGAGACTAATGGCATTCCAGAGACTAGGCTTCACAAGTGCTGACATTCTGGCTTGTATCAAGGAATCAAATGTGATTGGAATGGGAGCCACTGGGATTGTGTACAAAGCTGAGATGCCGAGGCTAAACACAGTTGTTGCAGTCAAGAAGCTATGGAGGTCAGAAACCGATATTGAAACTGGGAGCAGTGAAGATCTAGTGGGGGAAGTGAACCTCCTAGGGAGGCTAAGGCATCGAAACATTGTCCGGCTACTGGGTTTTCTTCATAATGATAGTGATGTGATGATAGTCTATGAGTTTATGCACAATGGCAGCCTAGGAGAAGCCTTACATGGAAAACAAGGAGGGAGGCTGCTGGTAGACTGGGTTTCTCGATACAATATAGCAATTGGGGTAGCCCAAGGGCTCGCCTATCTCCACCATGACTGTCATCCACCTGTCATTCATCGCGACGTCAAGTCAAATAACATACTGCTTGATGCAAATCTTGAGGCAAGAATTGCGGATTTCGGATTGGCGAGGATGATGGTCAGGAAGAATGAGACAGTTTCCATGGTGGCTGGATCATATGGATACATTGCTCCTGAATATGGATATACTTTGAAGGTTGATGAGAAGATCGACATCTACAGCTTTGGAGTGGTACTGCTGGAGCTTCTGACCGGAAAAAGGCCATTAGATGCTGAGTTTGGGGAATTAGTGGACATAGTAGAATGGGTTAGGTGGAAGATTAGGGACAACAGAGCCTTAGAAGAAGCTCTAGACCCCAATGTAGGAAACTGCAAATACGTTCAAGAAGAGATGCTTTTGGTCCTGAGGATAGCCCTTCTTTGCACTGCTAAGCTCCCCAAGGACAGGCCCTCCATGAGGGATGTGATAACAATGCTTGGGGAGGCAAAGCCAAGGAGGAAAAGCAGTAGCAACATCAATGGATATGACATTAACAAAGCGAGACCAGTGTTCAGCACCTCACCTGTAAATGGCCTTATGTAG 4125 44.02 MGGVVDEEGIARKFWIKFRNDSVVAMYTPFLVCLASGKLDSEAFLHCISQDVHFLKAFSQAYEIADDCADDDEDKDAIRKMRKLVIEALRMRDDAVRDWGFDLPKEIPYNSATSKYTDFLLATASGKTATPFEKTKVAAYTLAAIAPYMRFYAFISNEIQTLLDPNDGSHKYKKWIDSYSSQSFEASALQNEDLLDKLSISLTGEELEILEKVYHQATKLEVDFFYAQPVVQQTIVPLCRVHDHAKYHLTVFCDFDMTCTPIDSSALLAEIAIVTAPKIDLNASETQLVRMSSTDLKNTWGVLSTQYTEELEKCMESIVPSETVEKFNYEGLCKALEQLSDFEKRANSRVVQSGVLKGLNLEDIKRAGQGLILQDGCTGFFQKILKNDNLKADVNVLSYCWCGDFIKSAFSSGDLGVVRVYSNELAYEESISTGEIIKKMESAMEKLQAFKDILKEGCSNDMEHLTVYIGGSIGDLLCLLEADIGIVIGSSLNLRRLGDQFGVSFVPLFSGLVKKQQQLIEVLRMVGKNKMQVQAFLVLFFFYCCIGCYGRGVEKDEVSVLLSIKRGLVDPLNQLGDWKVEENGVGNGSVHCNWTGVWCNSKGGVERLDLSHMNLSGRVLDEIERLRSLAHLNFFDVSQNFFEGGFPVGFGRAPGLTILNASSNNFSGFLPEDLGNLTALEILDLRGSFFQGSIPKSFKNLQKLKFLGLSGNNLTGQIPREIGQLSSLETIILGYNEFEGEIPVELGNLTNLKYLDLAVGNHGGKIPAALGRLKLLNTVFLYKNNFEGEIPPEIGNITSLQLLDLSDNLLSGEIPAEIAKLKNLQLLNLMCNQLSGSVPSGLEWLPELEVLELWNNSLTGPLPNDLGKNSPLQWLDVSSNSFTGGIPPSLCNGGNLTKLILFNNGFSGPIPIGLSTCASLVRRLELANNSLTGQIPGQIPKTVATMPTLAILDLSNNSLTGTIPENFGTSPALESLNVSYNRLEGPVPTNGVLRTINPDDLVGNAGLFLAVGVAVFGARSLYKRWYSNGSCFTERFEVGNGEWPWRLMAFQRLGFTSADILACIKESNVIGMGATGIVYKAEMPRLNTVVAVKKLWRSETDIETGSSEDLVGEVNLLGRLRHRNIVRLLGFLHNDSDVMIVYEFMHNGSLGEALHGKQGGRLLVDWVSRYNIAIGVAQGLAYLHHDCHPPVIHRDVKSNNILLDANLEARIADFGLARMMVRKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSFGVVLLELLTGKRPLDAEFGELVDIVEWVRWKIRDNRALEEALDPNVGNCKYVQEEMLLVLRIALLCTAKLPKDRPSMRDVITMLGEAKPRRKSSSNINGYDINKARPVFSTSPVNGLM* 1375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7475678 7489174 - Vvi7g638 Vvi7g638 789504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g638 1374 SUPERFAMILY RNI-like 594 839 - -
Vvi7g638 1374 Gene3D - 9 228 IPR016084 -
Vvi7g638 1374 Pfam Leucine rich repeat N-terminal domain 555 600 IPR013210 -
Vvi7g638 1374 SUPERFAMILY L domain-like 764 1005 - -
Vvi7g638 1374 Pfam Protein kinase domain 1066 1336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g638 1374 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 924 1007 - -
Vvi7g638 1374 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1009 1354 - -
Vvi7g638 1374 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 538 936 - -
Vvi7g638 1374 SMART serkin_6 1064 1340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g638 1374 SUPERFAMILY Protein kinase-like (PK-like) 1063 1340 IPR011009 -
Vvi7g638 1374 Gene3D Phosphorylase Kinase; domain 1 1064 1148 - -
Vvi7g638 1374 Pfam TENA/THI-4/PQQC family 29 225 IPR004305 -
Vvi7g638 1374 Gene3D Ribonuclease Inhibitor 556 671 IPR032675 -
Vvi7g638 1374 SUPERFAMILY HAD-like 245 506 IPR036412 -
Vvi7g638 1374 SUPERFAMILY Heme oxygenase-like 27 225 IPR016084 -
Vvi7g638 1374 Gene3D Ribonuclease Inhibitor 762 1011 IPR032675 -
Vvi7g638 1374 Gene3D Ribonuclease Inhibitor 672 761 IPR032675 -
Vvi7g638 1374 Pfam Leucine rich repeat 921 983 IPR001611 GO:0005515
Vvi7g638 1374 Pfam Leucine rich repeat 679 737 IPR001611 GO:0005515
Vvi7g638 1374 Gene3D Transferase(Phosphotransferase) domain 1 1149 1362 - -
Vvi7g638 1374 ProSiteProfiles Protein kinase domain profile. 1064 1347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g638 1374 Gene3D - 250 501 IPR023214 -
Vvi7g638 1374 SMART LRR_typ_2 797 821 IPR003591 -
Vvi7g638 1374 SMART LRR_typ_2 701 725 IPR003591 -
Vvi7g638 1374 SMART LRR_typ_2 845 869 IPR003591 -
Vvi7g638 1374 SMART LRR_typ_2 946 970 IPR003591 -
Vvi7g638 1374 ProSitePatterns Protein kinases ATP-binding region signature. 1070 1094 IPR017441 GO:0005524
Vvi7g638 1374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1191 1203 IPR008271 GO:0004672|GO:0006468
Vvi7g638 1374 CDD TenA_C_AtTH2-like 10 227 - -
Vvi7g638 1374 PANTHER UNNAMED PRODUCT 1009 1354 - -
Vvi7g638 1374 PANTHER UNNAMED PRODUCT 538 936 - -
Vvi7g638 1374 PANTHER UNNAMED PRODUCT 924 1007 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76761 PF00069 Pkinase 6.70E-46 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g638 - - cic:CICLE_v10023610mg 1247.26