Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g664 | ATGAGGGTTGTGTTGCTGCTGCTGCTTCTCCATCTCGTCAATTTGGTTCTGTCTTGTTGCGGGCATCCATTATTGCATATATTCCTGTCTCCAACAATACTGCCTAAACAGCAACAGTCTACGAGGAAAATCTCATTGGAACAGGCAAGGCCCATGCCAATGAGTGTTTTGTTTACTTTATCTAGATCACCCCGGACGCGGGTGTTTAAGCCTTCTTTGGAGCCATCAACTGCCCCTGCACCTTCTCCAGCATATCACGGCTCTGTCTCTGGTCCTAGCAGTACTACCATACCAAGACATCATCACCATCATCATCATCATTATCATCATCATCAGGGGAAACAACATCATGCAGTCTCTCCAGCCCCCTCTACAGGAACAGGTTGTGATCAGATTTGTACGGAGCCTCTTGCAGCAACTCCATTTGGTTCCCCTTGTGGTTGTGTGTTTCCTATGAAAGTTAGACTTCTTCTGGATGTAGCCCTTTATGCTGTCTTTCCTGTGGTTGCTGAGCTAGCAATTGAGGTTGCAGCAGGCACATATCTGGAGCAGAGTCAAGTGAAGATAGTGGGCGCCAGTGCTGACAGTCAAAATCAGGGAAAGACAGTAGTAGATATTAACTTGGTTCCACTGGGAGAGAAGTTTGATAACACCACTGCTATGCTGACATGTGAGAGATTTTGGCAGAAGAAAGTGCCTCTAAATAGGACTCTTTTTGGTAACTATGATGTGTTGTACATTAATTATCCAGGGATTCCTTCTTCACCGCCATCTGGAAGTTACATGGGCAGTGGTCCAAGTGGAAGTGCTGGAGGTCTCCCCATAACTGCAGATTTTGTCAACAAGAGCCAGAAGTTGAATCCTAGAACCATTGCCATCATCGCTTTATCTGGTTTTGTGCTTGTATTGGTGTGCATTGGAGCAATTTCCATTGTTTTAAAATGGAGAAAGATTGGAAGACCATCAAGTGCTGTTGGTCCTGTATTTACATCATCCATCAATAAGAGATCTGGCATTGGTTCTATGTTATCAAGTAGCATAGCAAGTTCAACATCAGCATCCCTCATTTCCACCATGGCTACATGTGTTCTCTCTGTTAAAACATTTCCACTTGCTGAACTTGAGAAGGCAACACATAAGTTCAGTTCAAAGAGGATTTTAGGTGAAGGAGGATTTGGACGTGTTTACCATGGGACTATGGAAGATGGAACTGAAGTTGCAGTTAAGCTGCTTACAAGAGATCACCAGAGCGGAGATCGTGAGTTCATTGCTGAAGTTGAGATGCTCAGCCGATTACATCACCGCAATCTTGTGAAACTGATTGGTATATGCATTGAAGGACACACACGCTGCCTGGTGTATGAGCTTGTTCACAATGGCAGTGTTGAGTCTCACTTGCATGGTGCTGACAAGGGAAAGGGACCTCTCGACTGGGATGCACGGATGAAGATTGCCCTTGGTGCAGCAAGAGGATTGGCTTATCTTCATGAAGATTCTAATCCTCGTGTAATTCACCGAGATTTTAAGGCCAGCAATGTCCTACTAGAAGATGATTTCACCCCAAAGGTTTCGGATTTTGGGTTGGCAAGGGAAGCAACAGAAGGAAGTCATCATATATCTACTAGGGTCATGGGAACTTTTGGGTATGTTGCTCCTGAATATGCAATGACGGGGCATCTACTTGTCAAAAGTGATGTATACAGTTATGGGGTCGTGTTGCTTGAGCTTCTCTCTGGAAGAAAACCAGTTGACATGTCCCAACCACCAGGACAGGAGAACCTAGTAACCTGGGCACGGCCTCTGTTGACTGTTAGAGAAGGTTTGGAGCAGTTGGTGGATCCTTCTTTGGCTGGAAACTACGACTTTGACAACGTGGCTAAGGTTGCAGCCATTGCTTCCATGTGTGTTCACCCTGAGGTGACTCACAGACCCTTCATGGGTGAAGTAGTGCAGGCACTAAAACTGATTTACAACGACAAAGACGAGACTTGTGGGGATTGTTGTAGTCAGAAGGAATCTTCAGGTCCGGACTCAGATTTGAGAGGTGATCTTGACCCTTCTGATAGCAGTTGGTGGAATGCTGGAGGGATCACCCCACGCTTGACATACGGGCATGCCACGCCGTTCATAACCATGGAGTACAGCTCCGGTCCCCTTGAGGAGACGGAAAACAGACCGTTTTCAGCTTCAAGCCTGGTGGGGGAAGGGGCATCCTTACAAATCACACATGGGAACAGATCAGGGCCATTGAGAACAATCCGAAGCAAGCCAGGGTTCTATAGATTAAAAGGGAGTATGAGTGAACATGGGGTGCTTTCAAAGCGAGTTTGGAATGATGGTGCTTGGGTTTGA | 2352 | 46.13 | MRVVLLLLLLHLVNLVLSCCGHPLLHIFLSPTILPKQQQSTRKISLEQARPMPMSVLFTLSRSPRTRVFKPSLEPSTAPAPSPAYHGSVSGPSSTTIPRHHHHHHHHYHHHQGKQHHAVSPAPSTGTGCDQICTEPLAATPFGSPCGCVFPMKVRLLLDVALYAVFPVVAELAIEVAAGTYLEQSQVKIVGASADSQNQGKTVVDINLVPLGEKFDNTTAMLTCERFWQKKVPLNRTLFGNYDVLYINYPGIPSSPPSGSYMGSGPSGSAGGLPITADFVNKSQKLNPRTIAIIALSGFVLVLVCIGAISIVLKWRKIGRPSSAVGPVFTSSINKRSGIGSMLSSSIASSTSASLISTMATCVLSVKTFPLAELEKATHKFSSKRILGEGGFGRVYHGTMEDGTEVAVKLLTRDHQSGDREFIAEVEMLSRLHHRNLVKLIGICIEGHTRCLVYELVHNGSVESHLHGADKGKGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPPGQENLVTWARPLLTVREGLEQLVDPSLAGNYDFDNVAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDKDETCGDCCSQKESSGPDSDLRGDLDPSDSSWWNAGGITPRLTYGHATPFITMEYSSGPLEETENRPFSASSLVGEGASLQITHGNRSGPLRTIRSKPGFYRLKGSMSEHGVLSKRVWNDGAWV* | 784 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7953043 | 7979057 | - | Vvi7g664 | Vvi7g664 | 789530 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g664 | 783 | ProSitePatterns | Protein kinases ATP-binding region signature. | 387 | 409 | IPR017441 | GO:0005524 | |
Vvi7g664 | 783 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 503 | 515 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi7g664 | 783 | MobiDBLite | consensus disorder prediction | 97 | 116 | - | - | |
Vvi7g664 | 783 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | - | - | |
Vvi7g664 | 783 | Gene3D | Transferase(Phosphotransferase) domain 1 | 457 | 674 | - | - | |
Vvi7g664 | 783 | Gene3D | Phosphorylase Kinase; domain 1 | 354 | 456 | - | - | |
Vvi7g664 | 783 | CDD | STKc_IRAK | 387 | 656 | - | - | |
Vvi7g664 | 783 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 | 20 | 780 | - | - | |
Vvi7g664 | 783 | MobiDBLite | consensus disorder prediction | 668 | 687 | - | - | |
Vvi7g664 | 783 | SUPERFAMILY | Protein kinase-like (PK-like) | 366 | 653 | IPR011009 | - | |
Vvi7g664 | 783 | MobiDBLite | consensus disorder prediction | 69 | 123 | - | - | |
Vvi7g664 | 783 | Pfam | Protein tyrosine and serine/threonine kinase | 384 | 652 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi7g664 | 783 | PANTHER | OS01G0750732 PROTEIN | 20 | 780 | - | - | |
Vvi7g664 | 783 | ProSiteProfiles | Protein kinase domain profile. | 381 | 656 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76762 | PF07714 | PK_Tyr_Ser-Thr | 1.80E-47 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g664 | - | - | vvi:100265222 | 1476.07 |