Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g664 ATGAGGGTTGTGTTGCTGCTGCTGCTTCTCCATCTCGTCAATTTGGTTCTGTCTTGTTGCGGGCATCCATTATTGCATATATTCCTGTCTCCAACAATACTGCCTAAACAGCAACAGTCTACGAGGAAAATCTCATTGGAACAGGCAAGGCCCATGCCAATGAGTGTTTTGTTTACTTTATCTAGATCACCCCGGACGCGGGTGTTTAAGCCTTCTTTGGAGCCATCAACTGCCCCTGCACCTTCTCCAGCATATCACGGCTCTGTCTCTGGTCCTAGCAGTACTACCATACCAAGACATCATCACCATCATCATCATCATTATCATCATCATCAGGGGAAACAACATCATGCAGTCTCTCCAGCCCCCTCTACAGGAACAGGTTGTGATCAGATTTGTACGGAGCCTCTTGCAGCAACTCCATTTGGTTCCCCTTGTGGTTGTGTGTTTCCTATGAAAGTTAGACTTCTTCTGGATGTAGCCCTTTATGCTGTCTTTCCTGTGGTTGCTGAGCTAGCAATTGAGGTTGCAGCAGGCACATATCTGGAGCAGAGTCAAGTGAAGATAGTGGGCGCCAGTGCTGACAGTCAAAATCAGGGAAAGACAGTAGTAGATATTAACTTGGTTCCACTGGGAGAGAAGTTTGATAACACCACTGCTATGCTGACATGTGAGAGATTTTGGCAGAAGAAAGTGCCTCTAAATAGGACTCTTTTTGGTAACTATGATGTGTTGTACATTAATTATCCAGGGATTCCTTCTTCACCGCCATCTGGAAGTTACATGGGCAGTGGTCCAAGTGGAAGTGCTGGAGGTCTCCCCATAACTGCAGATTTTGTCAACAAGAGCCAGAAGTTGAATCCTAGAACCATTGCCATCATCGCTTTATCTGGTTTTGTGCTTGTATTGGTGTGCATTGGAGCAATTTCCATTGTTTTAAAATGGAGAAAGATTGGAAGACCATCAAGTGCTGTTGGTCCTGTATTTACATCATCCATCAATAAGAGATCTGGCATTGGTTCTATGTTATCAAGTAGCATAGCAAGTTCAACATCAGCATCCCTCATTTCCACCATGGCTACATGTGTTCTCTCTGTTAAAACATTTCCACTTGCTGAACTTGAGAAGGCAACACATAAGTTCAGTTCAAAGAGGATTTTAGGTGAAGGAGGATTTGGACGTGTTTACCATGGGACTATGGAAGATGGAACTGAAGTTGCAGTTAAGCTGCTTACAAGAGATCACCAGAGCGGAGATCGTGAGTTCATTGCTGAAGTTGAGATGCTCAGCCGATTACATCACCGCAATCTTGTGAAACTGATTGGTATATGCATTGAAGGACACACACGCTGCCTGGTGTATGAGCTTGTTCACAATGGCAGTGTTGAGTCTCACTTGCATGGTGCTGACAAGGGAAAGGGACCTCTCGACTGGGATGCACGGATGAAGATTGCCCTTGGTGCAGCAAGAGGATTGGCTTATCTTCATGAAGATTCTAATCCTCGTGTAATTCACCGAGATTTTAAGGCCAGCAATGTCCTACTAGAAGATGATTTCACCCCAAAGGTTTCGGATTTTGGGTTGGCAAGGGAAGCAACAGAAGGAAGTCATCATATATCTACTAGGGTCATGGGAACTTTTGGGTATGTTGCTCCTGAATATGCAATGACGGGGCATCTACTTGTCAAAAGTGATGTATACAGTTATGGGGTCGTGTTGCTTGAGCTTCTCTCTGGAAGAAAACCAGTTGACATGTCCCAACCACCAGGACAGGAGAACCTAGTAACCTGGGCACGGCCTCTGTTGACTGTTAGAGAAGGTTTGGAGCAGTTGGTGGATCCTTCTTTGGCTGGAAACTACGACTTTGACAACGTGGCTAAGGTTGCAGCCATTGCTTCCATGTGTGTTCACCCTGAGGTGACTCACAGACCCTTCATGGGTGAAGTAGTGCAGGCACTAAAACTGATTTACAACGACAAAGACGAGACTTGTGGGGATTGTTGTAGTCAGAAGGAATCTTCAGGTCCGGACTCAGATTTGAGAGGTGATCTTGACCCTTCTGATAGCAGTTGGTGGAATGCTGGAGGGATCACCCCACGCTTGACATACGGGCATGCCACGCCGTTCATAACCATGGAGTACAGCTCCGGTCCCCTTGAGGAGACGGAAAACAGACCGTTTTCAGCTTCAAGCCTGGTGGGGGAAGGGGCATCCTTACAAATCACACATGGGAACAGATCAGGGCCATTGAGAACAATCCGAAGCAAGCCAGGGTTCTATAGATTAAAAGGGAGTATGAGTGAACATGGGGTGCTTTCAAAGCGAGTTTGGAATGATGGTGCTTGGGTTTGA 2352 46.13 MRVVLLLLLLHLVNLVLSCCGHPLLHIFLSPTILPKQQQSTRKISLEQARPMPMSVLFTLSRSPRTRVFKPSLEPSTAPAPSPAYHGSVSGPSSTTIPRHHHHHHHHYHHHQGKQHHAVSPAPSTGTGCDQICTEPLAATPFGSPCGCVFPMKVRLLLDVALYAVFPVVAELAIEVAAGTYLEQSQVKIVGASADSQNQGKTVVDINLVPLGEKFDNTTAMLTCERFWQKKVPLNRTLFGNYDVLYINYPGIPSSPPSGSYMGSGPSGSAGGLPITADFVNKSQKLNPRTIAIIALSGFVLVLVCIGAISIVLKWRKIGRPSSAVGPVFTSSINKRSGIGSMLSSSIASSTSASLISTMATCVLSVKTFPLAELEKATHKFSSKRILGEGGFGRVYHGTMEDGTEVAVKLLTRDHQSGDREFIAEVEMLSRLHHRNLVKLIGICIEGHTRCLVYELVHNGSVESHLHGADKGKGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPPGQENLVTWARPLLTVREGLEQLVDPSLAGNYDFDNVAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDKDETCGDCCSQKESSGPDSDLRGDLDPSDSSWWNAGGITPRLTYGHATPFITMEYSSGPLEETENRPFSASSLVGEGASLQITHGNRSGPLRTIRSKPGFYRLKGSMSEHGVLSKRVWNDGAWV* 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7953043 7979057 - Vvi7g664 Vvi7g664 789530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g664 783 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Vvi7g664 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Vvi7g664 783 MobiDBLite consensus disorder prediction 97 116 - -
Vvi7g664 783 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vvi7g664 783 Gene3D Transferase(Phosphotransferase) domain 1 457 674 - -
Vvi7g664 783 Gene3D Phosphorylase Kinase; domain 1 354 456 - -
Vvi7g664 783 CDD STKc_IRAK 387 656 - -
Vvi7g664 783 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 20 780 - -
Vvi7g664 783 MobiDBLite consensus disorder prediction 668 687 - -
Vvi7g664 783 SUPERFAMILY Protein kinase-like (PK-like) 366 653 IPR011009 -
Vvi7g664 783 MobiDBLite consensus disorder prediction 69 123 - -
Vvi7g664 783 Pfam Protein tyrosine and serine/threonine kinase 384 652 IPR001245 GO:0004672|GO:0006468
Vvi7g664 783 PANTHER OS01G0750732 PROTEIN 20 780 - -
Vvi7g664 783 ProSiteProfiles Protein kinase domain profile. 381 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76762 PF07714 PK_Tyr_Ser-Thr 1.80E-47 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g664 - - vvi:100265222 1476.07