Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g67 ATGGATTTGAGAAGTGATGATGAGGTTTTAGTGACTGCAAAAGCTGAGAAATCCAGGACTGGAGAGGGAGAAACTGTCTCAGACAAGTCTAGTATTTCGAGTAGTGATTTGGGTTCAAAGAAGGATGGGGGGAATACTAGTAACAAGGATTTATTTCTTAGAGCAGATAAAATCGATTTCAAAAGCTGGGATATCCAGCTGGATAAGCACTTGAGTCGAGTTATTTCAAGGGATAGGGAAGTTAATACCAATACAAAGAAGGAAGACTGGGAAATTGAGTTGTCTAAATTGGATATAAGAAGTGTTATAGCTCATGGGACATATGGTACTGTGTACCGAGGCGTTTATGATGGCCAAGATGTTGCAGTGAAGCTGTTGGATTGGGGGGAGGATGGTCTTGCCACAGCTGCTGAAACTGCTGCTCTTCGGACCTCGTTTCGGCAAGAGGTTGCTGTCTGGCATAAGCTTGACCATCCAAATGTTACAAAGTTTATTGGAGCTTCGATGGGAACATCTGATCTTAGGATCCCTTCAAATAGCATTTCAAGTGATGGTCGTAATCCTGTTCCTTCCAGAGCATGTTGTGTTGTAGTCGAGTACCTTCCTGGTGGGACGCTAAAGAAATTTTTAATCAGGAATAGGAGAAAGAAACTTGCCTTTAAGATTGTAATTCAACTGGCTTTGGACCTCTCTCGAGGTTTGAGCTATCTTCACTCAAAGAAGATCGTACACCGTGATGTTAAAACAGAAAATATGTTGCTTGATGCTCATAGAACATTGAAAATTGCTGATTTTGGTGTTGCTCGAGTTGAAGCTCAAAATCCAAGAGACATGACTGGGGAAACCGGAACCCTTGGTTACATGGCCCCAGAGGTTCTTGATGGTAAACCATATAATAGGAAGTGTGACGTCTACAGTTTTGGCATATGCTTATGGGAAACGTATTGCTGTGACATGCCTTACCCTGATCTTAGCTTCGCCGATATATCATCTGCAGTTGTTCGACAGAATTTACGACCAGATATCCCTAGATGTTGCCCAAGTTCATTGGCAAGCATCATGCGGAAATGTTGGGATGGGAACCCTGACAAACGTCCTGACATGGATGAGGTGGTGAGGTTGTTAGAAGCCATTGATACGAGCAAAGGAGGCGGCATGATACCAGAAGACCAGGTTAGTAGCTGTTGCTTTTTCTCTGTGGCTCGTGGTCCCTGA 1215 43.46 MDLRSDDEVLVTAKAEKSRTGEGETVSDKSSISSSDLGSKKDGGNTSNKDLFLRADKIDFKSWDIQLDKHLSRVISRDREVNTNTKKEDWEIELSKLDIRSVIAHGTYGTVYRGVYDGQDVAVKLLDWGEDGLATAAETAALRTSFRQEVAVWHKLDHPNVTKFIGASMGTSDLRIPSNSISSDGRNPVPSRACCVVVEYLPGGTLKKFLIRNRRKKLAFKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDAHRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWETYCCDMPYPDLSFADISSAVVRQNLRPDIPRCCPSSLASIMRKCWDGNPDKRPDMDEVVRLLEAIDTSKGGGMIPEDQVSSCCFFSVARGP* 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 944891 950225 + Vvi7g67 Vvi7g67 788933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g67 404 SMART serkin_6 97 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g67 404 Gene3D Transferase(Phosphotransferase) domain 1 201 389 - -
Vvi7g67 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Vvi7g67 404 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 25 397 - -
Vvi7g67 404 MobiDBLite consensus disorder prediction 25 43 - -
Vvi7g67 404 PRINTS Tyrosine kinase catalytic domain signature 198 211 IPR001245 GO:0004672|GO:0006468
Vvi7g67 404 PRINTS Tyrosine kinase catalytic domain signature 236 254 IPR001245 GO:0004672|GO:0006468
Vvi7g67 404 PRINTS Tyrosine kinase catalytic domain signature 302 324 IPR001245 GO:0004672|GO:0006468
Vvi7g67 404 PRINTS Tyrosine kinase catalytic domain signature 346 368 IPR001245 GO:0004672|GO:0006468
Vvi7g67 404 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
Vvi7g67 404 Pfam Protein tyrosine and serine/threonine kinase 99 375 IPR001245 GO:0004672|GO:0006468
Vvi7g67 404 MobiDBLite consensus disorder prediction 1 43 - -
Vvi7g67 404 CDD STKc_MAP3K-like 103 375 - -
Vvi7g67 404 ProSiteProfiles Protein kinase domain profile. 97 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g67 404 SUPERFAMILY Protein kinase-like (PK-like) 81 375 IPR011009 -
Vvi7g67 404 MobiDBLite consensus disorder prediction 1 24 - -
Vvi7g67 404 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 397 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g538 Vvi7g67 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76763 PF07714 PK_Tyr_Ser-Thr 4.50E-58 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g67 - K01968 vvi:100852865 791.571