Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g765 ATGAGCTGCTTCCCGTGTTTTTCCTCGCATGAAAAGAAATCAGCTAAGAGGAGCACCAACACCAGGAACGGGGACTTGCCTCCTGCTGCAGCTGCAGTTACAGCTCCTATTAAACAACCCGTTAGACCACCGCAGCCGGTGAATCCTAAGCCACAGAGCATAGCTGAAACTACAGATACAAATGATGCCCCTGCTGATGGAAAGAATATTGGGTCGCAAATTTTCACTTTCCGAGAGCTGGCCTCAGCAACCAAGAATTTCCGGCAGGAATGTCTAGTGGGGGAAGGTGGATTTGGAAGAGTTTATAGAGGCCAACTCGAGCAAACTGGCCAGATTGTAGCTGTGAAGCAACTTGACAGGAATGGATTGCAAGGAAACAAAGAGTTTCTTGTGGAGGTTTTGATGTTGAGCCTCCTGCACCATGAAAATCTGGTAAATCTTATAGGATATTGTGCTGATGGAGAGCAAAGACTTCTGGTATATGAGTACATGCAATACGGATCTTTGGAAGACCATCTACTTGATGTTCCACCAGATCAAAAGCCATTAGATTGGTTCACCAGAATGAAGGTAGCACTAGGTGCTGCCAAAGGTTTGGAATATCTTCATGACAAGGCCAACCCCCCTGTCATTTATCGCGATTTGAAGTCCTCCAACATCTTGCTGGACAAAGATTTCAATGCAAAACTCTCTGATTTCGGGCTAGCAAAGCTCGGAACTGGTGATGACAAGATCCATGTATCTTCAAGGGTAATGGGAACATATGGTTATTGTGCCCCAGAATATCAACGAACAGGTCAACTGACTCTAAAGTCTGATATATACAGTTTTGGAGTTGTTTTACTAGAGTTGATCACTGGAAGGAGAGTGATTGATCCCACAAAGCCAGCCAAGGAGCAAAATCTAATCAACTGGGCAGAACCAATATTTAAGGACCCAAGTTCATTCCCACAACTTGCTGATCCACATCTTCAAGGAAACTACCCGAGGAGAGGACTGAACCAAGCAGTTGGGATTGCAGCGATGTGTCTCCAGGAGGAACCAGCAGTCCGTCCCTTGATCAGCGATGTGGTTTCTGTTCTCAGTTTCCTTTCCGTGGCTCCAGAGACAGGCGTTCCTCTACCTCTGCCCACTCCCCCGACTGATAACACGACGAGCACAAATGAAAATGATCGGGAAGATATCAGAAGGGAACGTGAACGAGAAGTAGCGGAAGCCATGGAGTGGGGAACAAATTCAAGGAACCACATGAGACCACAGGGCGGAAGTGATTCTACAATGTAA 1284 46.42 MSCFPCFSSHEKKSAKRSTNTRNGDLPPAAAAVTAPIKQPVRPPQPVNPKPQSIAETTDTNDAPADGKNIGSQIFTFRELASATKNFRQECLVGEGGFGRVYRGQLEQTGQIVAVKQLDRNGLQGNKEFLVEVLMLSLLHHENLVNLIGYCADGEQRLLVYEYMQYGSLEDHLLDVPPDQKPLDWFTRMKVALGAAKGLEYLHDKANPPVIYRDLKSSNILLDKDFNAKLSDFGLAKLGTGDDKIHVSSRVMGTYGYCAPEYQRTGQLTLKSDIYSFGVVLLELITGRRVIDPTKPAKEQNLINWAEPIFKDPSSFPQLADPHLQGNYPRRGLNQAVGIAAMCLQEEPAVRPLISDVVSVLSFLSVAPETGVPLPLPTPPTDNTTSTNENDREDIRREREREVAEAMEWGTNSRNHMRPQGGSDSTM* 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11636035 11638184 - Vvi7g765 Vvi7g765 789631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g765 427 MobiDBLite consensus disorder prediction 413 427 - -
Vvi7g765 427 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g765 427 MobiDBLite consensus disorder prediction 1 68 - -
Vvi7g765 427 MobiDBLite consensus disorder prediction 387 407 - -
Vvi7g765 427 PANTHER RECEPTOR-LIKE KINASE LIP1 1 401 - -
Vvi7g765 427 SMART serkin_6 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g765 427 Gene3D Phosphorylase Kinase; domain 1 59 163 - -
Vvi7g765 427 PANTHER OS07G0668900 PROTEIN 1 401 - -
Vvi7g765 427 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Vvi7g765 427 MobiDBLite consensus disorder prediction 51 67 - -
Vvi7g765 427 MobiDBLite consensus disorder prediction 369 427 - -
Vvi7g765 427 CDD STKc_IRAK 93 361 - -
Vvi7g765 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Vvi7g765 427 SUPERFAMILY Protein kinase-like (PK-like) 73 388 IPR011009 -
Vvi7g765 427 Pfam Protein kinase domain 89 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g765 427 Gene3D Transferase(Phosphotransferase) domain 1 164 369 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76767 PF00069 Pkinase 4.70E-47 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g765 - - vvi:100248308 794.653