Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g765 | ATGAGCTGCTTCCCGTGTTTTTCCTCGCATGAAAAGAAATCAGCTAAGAGGAGCACCAACACCAGGAACGGGGACTTGCCTCCTGCTGCAGCTGCAGTTACAGCTCCTATTAAACAACCCGTTAGACCACCGCAGCCGGTGAATCCTAAGCCACAGAGCATAGCTGAAACTACAGATACAAATGATGCCCCTGCTGATGGAAAGAATATTGGGTCGCAAATTTTCACTTTCCGAGAGCTGGCCTCAGCAACCAAGAATTTCCGGCAGGAATGTCTAGTGGGGGAAGGTGGATTTGGAAGAGTTTATAGAGGCCAACTCGAGCAAACTGGCCAGATTGTAGCTGTGAAGCAACTTGACAGGAATGGATTGCAAGGAAACAAAGAGTTTCTTGTGGAGGTTTTGATGTTGAGCCTCCTGCACCATGAAAATCTGGTAAATCTTATAGGATATTGTGCTGATGGAGAGCAAAGACTTCTGGTATATGAGTACATGCAATACGGATCTTTGGAAGACCATCTACTTGATGTTCCACCAGATCAAAAGCCATTAGATTGGTTCACCAGAATGAAGGTAGCACTAGGTGCTGCCAAAGGTTTGGAATATCTTCATGACAAGGCCAACCCCCCTGTCATTTATCGCGATTTGAAGTCCTCCAACATCTTGCTGGACAAAGATTTCAATGCAAAACTCTCTGATTTCGGGCTAGCAAAGCTCGGAACTGGTGATGACAAGATCCATGTATCTTCAAGGGTAATGGGAACATATGGTTATTGTGCCCCAGAATATCAACGAACAGGTCAACTGACTCTAAAGTCTGATATATACAGTTTTGGAGTTGTTTTACTAGAGTTGATCACTGGAAGGAGAGTGATTGATCCCACAAAGCCAGCCAAGGAGCAAAATCTAATCAACTGGGCAGAACCAATATTTAAGGACCCAAGTTCATTCCCACAACTTGCTGATCCACATCTTCAAGGAAACTACCCGAGGAGAGGACTGAACCAAGCAGTTGGGATTGCAGCGATGTGTCTCCAGGAGGAACCAGCAGTCCGTCCCTTGATCAGCGATGTGGTTTCTGTTCTCAGTTTCCTTTCCGTGGCTCCAGAGACAGGCGTTCCTCTACCTCTGCCCACTCCCCCGACTGATAACACGACGAGCACAAATGAAAATGATCGGGAAGATATCAGAAGGGAACGTGAACGAGAAGTAGCGGAAGCCATGGAGTGGGGAACAAATTCAAGGAACCACATGAGACCACAGGGCGGAAGTGATTCTACAATGTAA | 1284 | 46.42 | MSCFPCFSSHEKKSAKRSTNTRNGDLPPAAAAVTAPIKQPVRPPQPVNPKPQSIAETTDTNDAPADGKNIGSQIFTFRELASATKNFRQECLVGEGGFGRVYRGQLEQTGQIVAVKQLDRNGLQGNKEFLVEVLMLSLLHHENLVNLIGYCADGEQRLLVYEYMQYGSLEDHLLDVPPDQKPLDWFTRMKVALGAAKGLEYLHDKANPPVIYRDLKSSNILLDKDFNAKLSDFGLAKLGTGDDKIHVSSRVMGTYGYCAPEYQRTGQLTLKSDIYSFGVVLLELITGRRVIDPTKPAKEQNLINWAEPIFKDPSSFPQLADPHLQGNYPRRGLNQAVGIAAMCLQEEPAVRPLISDVVSVLSFLSVAPETGVPLPLPTPPTDNTTSTNENDREDIRREREREVAEAMEWGTNSRNHMRPQGGSDSTM* | 428 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11636035 | 11638184 | - | Vvi7g765 | Vvi7g765 | 789631 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g765 | 427 | MobiDBLite | consensus disorder prediction | 413 | 427 | - | - | |
Vvi7g765 | 427 | ProSiteProfiles | Protein kinase domain profile. | 87 | 364 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi7g765 | 427 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
Vvi7g765 | 427 | MobiDBLite | consensus disorder prediction | 387 | 407 | - | - | |
Vvi7g765 | 427 | PANTHER | RECEPTOR-LIKE KINASE LIP1 | 1 | 401 | - | - | |
Vvi7g765 | 427 | SMART | serkin_6 | 87 | 364 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi7g765 | 427 | Gene3D | Phosphorylase Kinase; domain 1 | 59 | 163 | - | - | |
Vvi7g765 | 427 | PANTHER | OS07G0668900 PROTEIN | 1 | 401 | - | - | |
Vvi7g765 | 427 | ProSitePatterns | Protein kinases ATP-binding region signature. | 93 | 116 | IPR017441 | GO:0005524 | |
Vvi7g765 | 427 | MobiDBLite | consensus disorder prediction | 51 | 67 | - | - | |
Vvi7g765 | 427 | MobiDBLite | consensus disorder prediction | 369 | 427 | - | - | |
Vvi7g765 | 427 | CDD | STKc_IRAK | 93 | 361 | - | - | |
Vvi7g765 | 427 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 210 | 222 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi7g765 | 427 | SUPERFAMILY | Protein kinase-like (PK-like) | 73 | 388 | IPR011009 | - | |
Vvi7g765 | 427 | Pfam | Protein kinase domain | 89 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi7g765 | 427 | Gene3D | Transferase(Phosphotransferase) domain 1 | 164 | 369 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76767 | PF00069 | Pkinase | 4.70E-47 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g765 | - | - | vvi:100248308 | 794.653 |