Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g769 ATGGACACGGTTTGCTTCTGGGTTTGCTTCTTTTTGTTGTTTTGGCTTGGAAATGTGGGTTTCTGCTATCAAGATGGGTTCTTGAGTTTATCTTGTGGCGCAACTGCAGACTTCGTTGATTCAACCAACATATCATGGGTCTCGGATAGTACTTATGTTGATACAGGCAACACTACCACCATTGACTTCATCGAGGGAACCTCCTCCTCACATGTACCGATTCGGTTTTTCCCAGATTCCAAAGGCCGCAAGTGTTACAGATTACCCGTGAAGAATGTGTCATCAGTGGTTCTTGTTAGAACCCAGTTTGTGTACAAGAACTATGATGGTCTGGCCAAACCCCCTGCATTCTCTGTTTCTCTAGGGACAGCTATTACCACCACTGCAAACCTCACTGTTTCTGATCCATGGACAGAAGAGTTTGTATGGTCAGTTAATCAAGACATCCTCCCATTGTGTTTACATGCCCTTCCAGGAGGTGGAGTTCCGGTTATATCATCACTTGAAGTCCGGCCTCTCCCTCAGAGAGCTTACACAAGTGGCATGGAAGATTTCCCCAATAAGTCCCTCAGGAAGTGTTATAGAATCAATTGTGGCTATGCTAATGGATCACTGAGGTACCCTTTGGATTCATATGATCGTATATGGGATGCAGATCAAAGCTTTTCACCATTCCATTTGTCAACTGGGTTCAACATTCAGCTCAGCTTCAATTTATCAAGTATTGAGGAGAGCCCTCCTCTGGCTGTTCTTCAAACTGCAAGAGTTTTGGCCAGGAGGGATGCATTGGCTTATTACTTTCCCCTTGATAAGCTAGGGGACTACTACATTGTCCTCTATTTTGCTGGAATTCTTCCTGTGTCTCCAACTTTTGATGTATTGATTAATGGAGATGTTGTATGGTCAAGTTACACTGTGAAAAACTCTGAAGCCACTGCTCTGTTCTTTACGCGAAAGGGAATCAAGAGCTTGAGCATCACATTGAAGAATATCAGCTTCAACCCTCTAATCAATGCAATTGAGGTGTATGAGATGGTTGATATTCCCTCAGAAACTTCCTCAACTACAGTTTCGGCACTTCAGGTTATTCAACAATCAACTGGTTTGGATCTTGGATGGCAAGATGATCCATGCTCTCCTACACCATGGGATCATATCAGCTGCCAAGGAAGTCTGGTTACTTCATTGGGGCTTCCCAACATTAACTTGAGGTCAATCAGTCCTACATTTGGTGACTTATTGGATCTTAGAACACTGGATTTGCACAACACATCACTTACAGGGAAGATACAGAACTTGGATAGCCTGCAACACCTTGAAAAACTGAATTTGAGTTTCAATCAGCTAACATCCTTTGGTTCTGATTTGGAGAATTTGATCAGCCTTCAAATTTTGGACTTGCAAAACAATAGTTTAGAGGGAACAGTTCCTGAGAGCTTGGGAGAGTTAAAGGACCTTCACCTATTGAATCTGGAAAACAATAAACTTCAAGGCACCCTCCCAGACTCTCTAAACCGAGAAAGTTTGGAAGTTAGATCATCAGGCAATTTGTGCCTTTCCTTCTCCATTTCAACATGTAGTGAGGTTCCATCCAATCCTTCAATTGAGACACCACAAGTTACCATCTTTAACAAAAAGCAGCATGATGATCATAACCTGAGAACAATTATACTTGGAGCGGTTGGTGGAGTTTTGTTTGCAGTTATTGTTACATCCCTGTTAGTGTTCTTGTACATGAGGAGAAAGAGAACTGAAGTCACATACTCAGAAAGGGCAGGAGTAGATATGAGAAACTGGAATGCAGCAGCAAGAATCTTTTCCCACAAAGAAATCAAAGCAGCTACAAACAACTTCAAGGAGGTTATAGGACGTGGTAGTTTCGGATCTGTTTACATTGGCAAGCTTCCAGATGGAAAACTAGTAGCTGTGAAGGTGCGGTTCGATAGAACACAACTTGGGGCTGATTCCTTTATCAATGAGGTGCATCTTTTGTCACAAATTCGTCATCAAAATCTTGTCAGTTTGGAAGGATTTTGTCATGAATCAAAGCAGCAAATTCTAGTCTATGAGTATTTGCCTGGTGGATCATTGGCTGACAATCTTTATGGTGCAAATGGTAGAAGGATAACTTTAAGCTGGGTTCGCAGACTGAAAATTGCTGTTGATGCTGCAAAAGGGTTGGACTATTTACACAATGGGAGCAATCCAAGAATCATACACCGTGATGTGAAGTGCAGTAATATCCTTTTGGACATGGAGATGAATGCCAAGGTCTGTGACTTTGGCCTTTCCAAGCAAGTAACACAGGCTGATGCAACTCATGTCACTACTGTTGTCAAGGGCACTGCTGGCTATCTTGATCCTGAATACTACTCCACCCAACAGCTTACCGAGAAAAGTGATGTCTACAGCTTTGGAGTTGTTCTTTTGGAGCTGATTTGTGGGCGAGAACCATTAAGTCACTCTGGAACTCCTGATTCCTTCAATTTGGTCTTATGGGCCAAGCCCTACCTGCAGGCAGGTGCATTTGAGATAGTGGATGAGAGCATAAAGGGAAATTTTGATGTGGAGAGCATGAGAAAGGCAGCCCTGATTGCATCAAGGAGTGTGGAGAGAGATGCAGCACAAAGGCCTGTGATGGCAGAGGTATTGGCAGAGCTCAAAGAGGCCTACAGCATTCAGCTTTCTTATCTAGCATCTTGTGGCCATCTGAATTAA 2718 42.97 MDTVCFWVCFFLLFWLGNVGFCYQDGFLSLSCGATADFVDSTNISWVSDSTYVDTGNTTTIDFIEGTSSSHVPIRFFPDSKGRKCYRLPVKNVSSVVLVRTQFVYKNYDGLAKPPAFSVSLGTAITTTANLTVSDPWTEEFVWSVNQDILPLCLHALPGGGVPVISSLEVRPLPQRAYTSGMEDFPNKSLRKCYRINCGYANGSLRYPLDSYDRIWDADQSFSPFHLSTGFNIQLSFNLSSIEESPPLAVLQTARVLARRDALAYYFPLDKLGDYYIVLYFAGILPVSPTFDVLINGDVVWSSYTVKNSEATALFFTRKGIKSLSITLKNISFNPLINAIEVYEMVDIPSETSSTTVSALQVIQQSTGLDLGWQDDPCSPTPWDHISCQGSLVTSLGLPNINLRSISPTFGDLLDLRTLDLHNTSLTGKIQNLDSLQHLEKLNLSFNQLTSFGSDLENLISLQILDLQNNSLEGTVPESLGELKDLHLLNLENNKLQGTLPDSLNRESLEVRSSGNLCLSFSISTCSEVPSNPSIETPQVTIFNKKQHDDHNLRTIILGAVGGVLFAVIVTSLLVFLYMRRKRTEVTYSERAGVDMRNWNAAARIFSHKEIKAATNNFKEVIGRGSFGSVYIGKLPDGKLVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSLEGFCHESKQQILVYEYLPGGSLADNLYGANGRRITLSWVRRLKIAVDAAKGLDYLHNGSNPRIIHRDVKCSNILLDMEMNAKVCDFGLSKQVTQADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLSHSGTPDSFNLVLWAKPYLQAGAFEIVDESIKGNFDVESMRKAALIASRSVERDAAQRPVMAEVLAELKEAYSIQLSYLASCGHLN* 906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11795245 11800378 + Vvi7g769 Vvi7g769 789635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g769 905 PANTHER OS07G0107800 PROTEIN-RELATED 13 903 - -
Vvi7g769 905 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Vvi7g769 905 Pfam Leucine rich repeat 438 496 IPR001611 GO:0005515
Vvi7g769 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Vvi7g769 905 SMART serkin_6 616 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g769 905 Gene3D Transferase(Phosphotransferase) domain 1 692 897 - -
Vvi7g769 905 Gene3D - 191 346 - -
Vvi7g769 905 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 903 - -
Vvi7g769 905 Pfam Malectin-like domain 30 344 IPR024788 -
Vvi7g769 905 Gene3D Phosphorylase Kinase; domain 1 580 691 - -
Vvi7g769 905 SMART LRR_typ_2 483 507 IPR003591 -
Vvi7g769 905 SMART LRR_typ_2 459 482 IPR003591 -
Vvi7g769 905 SMART LRR_typ_2 436 458 IPR003591 -
Vvi7g769 905 Pfam Protein kinase domain 619 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g769 905 SUPERFAMILY L domain-like 358 506 - -
Vvi7g769 905 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Vvi7g769 905 CDD STKc_IRAK 622 889 - -
Vvi7g769 905 SUPERFAMILY Protein kinase-like (PK-like) 599 887 IPR011009 -
Vvi7g769 905 ProSiteProfiles Protein kinase domain profile. 616 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g769 905 Gene3D Ribonuclease Inhibitor 355 528 IPR032675 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76768 PF12819 Malectin_like 5.40E-57 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g769 - - vvi:100263624 1799.25