Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g810 ATGAAGCAATATCACTTCCCCTGTGGTTTTGTTGATAAACACAAAGCAAGAAAGCATGGACATGAGAAACTTGGAATAGGAGAAATGGAAAGCAGCATGTGCCTTAGCAGTGCAATTTTGTCTCTGTGTTTGTCATGTATGTGGTTGGGAGTAGTGCCTTCCATTTCTAGTGCACAGACAGACACCATCAAACCTGGGGAAGAGCTTCAATTCTCGGAAAAATTACTGGTTTCTGCAAAAGGGACTTTTACTCTAGGCTTCTTCAGCCTGGAATCTGGCAGTTATTTAGGAATATGGTACACAACTGATGATTATCACAAGAAAGTTTGGGTTGCTAACAGAGACAAGGCTATATCCGGCACCGATGCAAATCTCACGCTGGATGCCGATGGCAAATTGATGATCACGCATAGTGGGGGTGATCCAATTGTCCTGAATTCCAATCAAGCAGCCAGAAACTCAACAGCTACTCTGCTTGATTCTGGAAATTTTGTTTTGGAAGAGTTCAATTCGGATGGATCTCTGAAGGAGAAACTATGGGCGAGTTTCGATAATCCTACAGACACCCTCCTGCCTGGGATGAAACTAGGCATCAACTTGAAAACCGGGCGAAACTGGTCACTTGCTTCATGGATAAGCGAACAAGTGCCTGCTCCTGGGACTTTTACTCTGGAATGGAATGGCACACAATTGGTGATGAAACGCCGAGGGGGCACCTACTGGAGCAGTGGAACCTTGAAAGATAGGAGCTTTGAGTTCATTCCTTGGTTGATGAGCTCTGACACTTTCAATAACATCTACAGTTTTAACAGTGTTTCGAATGCAAACGAGATTTACTTTAGCTATTCAGTTCCAGAAGGAGTTGTTTCAGACTGGGTATTGACCTCGGAAGGGGGACTTTTTGACACTAGTAGACCCGTATTTGTGCTGGACGATCAGTGCGCTAGGTATGAAGAATATCCAGGGTGTGCAGTGCAAAACCCACCCACTTGCAGGTCTAGAAAAGACGGATTCATGAAGCAATCGGTTCTCATATCAGGATCACCATCATCAATAAAAGAAAAATCGAGCTTGGGCCTTAGGGATTGTAAGGCTTTATGCTGGAATGATTGTTCTTGTACTGCTTATAATAGTTTATACACTAACGGAACTGGATGTCGGTTTTGGAGTACAAAATTTGCACAAGCCCTCAAGGATGACGCAAATCAGGAGGAGCTCTATGTTTTATCCTCATCACGAGTTACGGGTAAGAATCCTGCTAGAAGAAAGATATTGGACTGGAAAAGACGTCACAATATCATTGAGGGGATTGCACAAGGACTTCTTTACTTGCATAAATATTCAAGACTAAGAATTATTCATAGAGATCTAAAAGCAAGTAACATCCTACTTGATCATGACTTGAACCCGAAAATTTCTGATTTTGGCATGGCCAGAACTTTTGGGCGAAATGCATCGGAAGCAAATACAAATAGGATAGTTGGAACATATGGTTACATGCCACCCGAGTATGCCATGGAAGGAATTTTCTCGGTGAAATCAGATGTTTATAGCTTTGGGGTCCTACTGTTGGAGATTGTGAGCGGCCGAAAGAACAAAAGCTTTCATCATAACCACGGTGCCTTTGCCATAAACCTGGCAGTATACGCTTGGGATCTATGGAAAGAAGGTACTAGCTTGGAGCTAGTGGATCCAATGCTGGAGGATTCCTACTCAACAACCCAAATGTTGAGATGCATTCATATTGCTCTCTTGTGCGTACAGGAGAGCGCAGCAGATAGGCCTACAATGTCAGCTGTTATCTCCATGCTCACCAACGAAACTGTGCCCCTACCAAACCCAAATCTACCCGCATTTTCCACTCATCATAAAGTGTCAGAGCTAGATTCACACAAAGGCAGGCCAGAGAGTTGTTCTGGATATGTAACTATTTCAGAGACGGAAGAAACTTTGTTTTTTACTTTTGAAATTTAG 1974 43.11 MKQYHFPCGFVDKHKARKHGHEKLGIGEMESSMCLSSAILSLCLSCMWLGVVPSISSAQTDTIKPGEELQFSEKLLVSAKGTFTLGFFSLESGSYLGIWYTTDDYHKKVWVANRDKAISGTDANLTLDADGKLMITHSGGDPIVLNSNQAARNSTATLLDSGNFVLEEFNSDGSLKEKLWASFDNPTDTLLPGMKLGINLKTGRNWSLASWISEQVPAPGTFTLEWNGTQLVMKRRGGTYWSSGTLKDRSFEFIPWLMSSDTFNNIYSFNSVSNANEIYFSYSVPEGVVSDWVLTSEGGLFDTSRPVFVLDDQCARYEEYPGCAVQNPPTCRSRKDGFMKQSVLISGSPSSIKEKSSLGLRDCKALCWNDCSCTAYNSLYTNGTGCRFWSTKFAQALKDDANQEELYVLSSSRVTGKNPARRKILDWKRRHNIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDHDLNPKISDFGMARTFGRNASEANTNRIVGTYGYMPPEYAMEGIFSVKSDVYSFGVLLLEIVSGRKNKSFHHNHGAFAINLAVYAWDLWKEGTSLELVDPMLEDSYSTTQMLRCIHIALLCVQESAADRPTMSAVISMLTNETVPLPNPNLPAFSTHHKVSELDSHKGRPESCSGYVTISETEETLFFTFEI* 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13338990 13343985 + Vvi7g810 Vvi7g810 789676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g810 657 SUPERFAMILY Protein kinase-like (PK-like) 420 625 IPR011009 -
Vvi7g810 657 ProSiteProfiles PAN/Apple domain profile. 331 412 IPR003609 -
Vvi7g810 657 SMART ntp_6 333 410 IPR003609 -
Vvi7g810 657 Gene3D Transferase(Phosphotransferase) domain 1 412 610 - -
Vvi7g810 657 Pfam PAN-like domain 331 393 IPR003609 -
Vvi7g810 657 ProSiteProfiles Protein kinase domain profile. 278 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g810 657 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 419 628 - -
Vvi7g810 657 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 60 393 - -
Vvi7g810 657 ProSiteProfiles Bulb-type lectin domain profile. 60 179 IPR001480 -
Vvi7g810 657 SMART serkin_6 338 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g810 657 PANTHER KINASE PBS1, PUTATIVE-RELATED 60 393 - -
Vvi7g810 657 PANTHER KINASE PBS1, PUTATIVE-RELATED 419 628 - -
Vvi7g810 657 SMART blect_4 67 186 IPR001480 -
Vvi7g810 657 CDD B_lectin 76 186 IPR001480 -
Vvi7g810 657 Pfam Protein tyrosine and serine/threonine kinase 422 604 IPR001245 GO:0004672|GO:0006468
Vvi7g810 657 SUPERFAMILY alpha-D-mannose-specific plant lectins 108 213 IPR036426 -
Vvi7g810 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Vvi7g810 657 Pfam D-mannose binding lectin 109 211 IPR001480 -
Vvi7g810 657 Gene3D - 54 183 IPR036426 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g1040 Vvi7g810 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76770 PF07714 PK_Tyr_Ser-Thr 7.00E-27 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g810 - - vvi:100263838 751.51