Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g832 | ATGGCTGTTCCAGAAGTCAATAAGGAATTTCTTGGGGAACTTGAAGCGATGGGATTCCCTGTAGCCAGAGCAACAAGGGCGCTTCATTTTTCTGGTAATGACAGTCTGGCAGCTGCTGTAAGTTGGATTATTGATCATGAAAATGACCCAGACATTGATCAGATGCCCTCGATAACAGTCGACATTGGTATTGAGTCTCCTAAACCATTTCAGATTTCTGAAGAAATGAAGAAAAAGGCACAAGAATTAAGAAATCGAGCACGCAGAAGGCAAGAAGAAGAAGAAAAGAAACGGGAAAGAGAAAGGGAGAAGAATAGGATTCGGGCTGGAAAGGAACTCCTTGAAGCAAAACGAATTGATGAAGAAAATGAACGAAAACGTATGTTAGCCTATTGGGAATCAGAGAAAGAGGAACAGAAAAGAGCAAGGGAGAAACTTCTCAAGAAATTAATGGAAGACAAGGCTGAAAGAAGAAGCAAGCTTGGATTGCCACCTGAAAACCCTGCTAGTGTAAAAACTTCCTTGCCTGTTGTACTGGAAAAGAACTCATTGTTCACTAAACTTGATACAAAGGCAGAGCCCTTGAGAGAATGTTTAAGGTTTCTCAAAAAAAGTCACAAGAATGATGATGCCAGAGTGAAAAGGGCCTTCCAAACTCTTCTGATTTATATCAGAAATGTTGCTAAGCATCCTGATGAGGAAAAGTTCCGGAAGATCCGATTTAGTAACCCAGCCTTCCAGGAAAGGGTTGGGAGTTTGACAGGAGGTATTGAGTTTCTCGAGCTTTGTGGGTTTGAGAGAACTGAAGACGGTGAATTCTTATTTCTACCTCAGGAGAAGGTTGACATGGCAGTCTTGAATTCAGCTGGATCTGTGTTGAACTCTGCAATGACAAACCCCTTCTTTGGAGTTTTTTCAAGTTGA | 924 | 41.56 | MAVPEVNKEFLGELEAMGFPVARATRALHFSGNDSLAAAVSWIIDHENDPDIDQMPSITVDIGIESPKPFQISEEMKKKAQELRNRARRRQEEEEKKREREREKNRIRAGKELLEAKRIDEENERKRMLAYWESEKEEQKRAREKLLKKLMEDKAERRSKLGLPPENPASVKTSLPVVLEKNSLFTKLDTKAEPLRECLRFLKKSHKNDDARVKRAFQTLLIYIRNVAKHPDEEKFRKIRFSNPAFQERVGSLTGGIEFLELCGFERTEDGEFLFLPQEKVDMAVLNSAGSVLNSAMTNPFFGVFSS* | 308 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 14025101 | 14037495 | - | Vvi7g832 | Vvi7g832 | 789698 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g832 | 307 | Coils | Coil | 129 | 156 | - | - | |
Vvi7g832 | 307 | Gene3D | - | 198 | 296 | - | - | |
Vvi7g832 | 307 | PANTHER | F13M7.16 PROTEIN | 1 | 307 | - | - | |
Vvi7g832 | 307 | PANTHER | PUB DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 307 | - | - | |
Vvi7g832 | 307 | MobiDBLite | consensus disorder prediction | 82 | 104 | - | - | |
Vvi7g832 | 307 | SMART | uba_6 | 7 | 45 | IPR015940 | - | |
Vvi7g832 | 307 | CDD | UBA_PUB_plant | 5 | 53 | - | - | |
Vvi7g832 | 307 | SUPERFAMILY | PUG domain-like | 206 | 301 | IPR036339 | - | |
Vvi7g832 | 307 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 5 | 46 | IPR015940 | - | |
Vvi7g832 | 307 | CDD | PUB_UBA_plant | 199 | 304 | - | - | |
Vvi7g832 | 307 | Pfam | UBA/TS-N domain | 12 | 43 | IPR015940 | - | |
Vvi7g832 | 307 | SMART | PGNneu | 215 | 278 | - | - | |
Vvi7g832 | 307 | Gene3D | - | 8 | 53 | - | - | |
Vvi7g832 | 307 | SUPERFAMILY | UBA-like | 4 | 56 | IPR009060 | GO:0005515 | |
Vvi7g832 | 307 | Coils | Coil | 73 | 110 | - | - | |
Vvi7g832 | 307 | Pfam | PUB domain | 212 | 282 | IPR018997 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g832 | K24348 | - | vvi:100264566 | 560.451 |