Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g859 ATGTCATCATCTAATTCTCCTTGCGCGGCGTGCAAGCTTCTCAGACGGAAATGTACGCAAGAGTGTGTATTCGCACCCTATTTCCCACCAGATCAGCCTCAAAAATTCGCTAATGTCCACAAGGTCTTCGGTGCAAGCAATGTTTCAAAGCTACTCAACGAACTAAATGCCGCCCATCGAGAAGATGCCGTGAATTCCCTAGCTTATGAAGCGGAGGCTCGTCTTCGTGATCCCGTCTATGGCTGCGTCGGTCTGATTTCAATTCTTCAACAAAGACTCAAGCAAGTTCAGAATGACCTTTTCACTGCCAAAAAGGAACTATCTGCATATATTGGTCCCTCAGCGATGCTACCTATTCCTCAACCTGCCGGCTGTTTGCCACAACAACACATGAGTAATCCTTGCTCATCGTCTCAGATTCCTTATAATACGCCTCCAATGTTGGGTCTTGCCACCGGTCCAACACATGGTAGGCAATTGGTAATACGTGAGCCGCACCAAACGCAGCAGTATCAGCATCAGCAGCAGATCCTTGAGGCTCAGCAAATAGCGGAAGCTGTGGCAGCAAGAGAGCAACAAGAGATGTTGAGGACTTATGAGCAGCAGCGGCAACAACAACAACTGCTTGTTAGGTTCAACAGTGGGTTTGACGCAGGTGGTACGGTTGGTGCAAGTAGTTTCAACCAGATGACTGCTGCAATTTCACCATCCCTGGCTTTGGGTCCATTTGATAATTCTTATCAGCTTGAAGAACAGCAACAAGAGCTTCATAGGCCCCAGATGCTGCTTTCAACCCAAACACAACCTCAACAACAGCAACCACAGTTACCTCAACAGCAACAAGGTTTGGAAGCAAGGAGGGTGGGAGCGGGGGCCTATATTTTTGAAGTCTTGCAGCTCAATCTTTCAACGATTTTTCCTTCTTAG 927 47.57 MSSSNSPCAACKLLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVSKLLNELNAAHREDAVNSLAYEAEARLRDPVYGCVGLISILQQRLKQVQNDLFTAKKELSAYIGPSAMLPIPQPAGCLPQQHMSNPCSSSQIPYNTPPMLGLATGPTHGRQLVIREPHQTQQYQHQQQILEAQQIAEAVAAREQQEMLRTYEQQRQQQQLLVRFNSGFDAGGTVGASSFNQMTAAISPSLALGPFDNSYQLEEQQQELHRPQMLLSTQTQPQQQQPQLPQQQQGLEARRVGAGAYIFEVLQLNLSTIFPS* 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14506355 14507958 + Vvi7g859 Vvi7g859 789725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g859 308 PANTHER LOB DOMAIN-CONTAINING PROTEIN 36-LIKE 1 282 - -
Vvi7g859 308 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Vvi7g859 308 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 282 - -
Vvi7g859 308 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Vvi7g859 308 Coils Coil 86 106 - -
Vvi7g859 308 Coils Coil 189 209 - -
Vvi7g859 308 MobiDBLite consensus disorder prediction 263 282 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15069 PF03195 LOB 4.00E-41 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g859 - - vvi:100240825 501.901