Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g884 ATGTCTCTTCTCGTTCTTCTCTGCATCCTCAACATAGCAACCGCCACTGCAGCCCATCTCCGGCCTGGGTTCTACTCTGAATCTTGCCCCGAAGCAGAGTTAATAGTGAGGGAAGTGATGAAGAAGGCCATGATTAAAGAACCCAGGAGTGGGGCATCGGTCATGCGACTACAATTCCATGACTGCTTTGTTAATGGGTGTGATGCTTCTTTGTTACTAGATGATACACCAAACATGTTAGGGGAAAAGCTGGCTTTATCGAATATAAACTCGTTAAGATCCTTCGAAGTTATCGACCAAGTGAAGGAAGCATTGGAGAAGTCATGTCCAGAGACGGTTTCTTGCGCAGATATCATAATCATGGCCTCTAGAGATGCGGTGGCACTGAGCGGAGGACCCGACTGGGAAGTGAAGCTAGGAAGAAAAGACAGCTTAACGGCGAGCCAAGAAGACTCGAACAACATCATGCCAAGCCCAAGATCGAACGCCAGTTTCCTCGTAGATCTCTTCAACCAATTCAATCTATCTGTCAAGGATCTTGTAGCCCTTTCTGGTTCACACTCCATCGGACAGGGCAGGTGCTTTTCCATCATGTTTCGACTCTATAACCAATCAGGTACGGGCCGCCCTGACCCTGCCATCGAACCGAAGTATAGAAACAGGCTGAACAAGCTTTGCCCGCTCAACGTAGACCAGAACGTGACAGGAGACCTCGATGCAACACCCGAAATATTTGATAACCAATACTTCAAGGACTTGGTTTCAGGGAGAGGGTTCTTGAATTCAGATGAGACACTATTCACCTATCCGCGGACCAGAAAATTTGTGCAGGTTTATAGTAATGACCAAATTAAATTTTTCAAGGATTTTGCCAAGGCGATGATAAAGATGGGAGACTTGCAGTCTGGGCGGCCAGGAGAGATCAGAAGAAACTGTAGAATGGTTAACAGCCGGTCAGATAGTTGCATTGCATATGGTGGCATGCTTTCAAAGGTGGGGTGGGGGGGATCATGGGGAGCAAGCTGGATGCTGCACGAATTTCTAATGATTCAAAGGGGAAAGCTGATCGTCTCTTTTGACATTTGA 1086 47.05 MSLLVLLCILNIATATAAHLRPGFYSESCPEAELIVREVMKKAMIKEPRSGASVMRLQFHDCFVNGCDASLLLDDTPNMLGEKLALSNINSLRSFEVIDQVKEALEKSCPETVSCADIIIMASRDAVALSGGPDWEVKLGRKDSLTASQEDSNNIMPSPRSNASFLVDLFNQFNLSVKDLVALSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEPKYRNRLNKLCPLNVDQNVTGDLDATPEIFDNQYFKDLVSGRGFLNSDETLFTYPRTRKFVQVYSNDQIKFFKDFAKAMIKMGDLQSGRPGEIRRNCRMVNSRSDSCIAYGGMLSKVGWGGSWGASWMLHEFLMIQRGKLIVSFDI* 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14809963 14812247 + Vvi7g884 Vvi7g884 789750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g884 361 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Vvi7g884 361 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 CDD secretory_peroxidase 19 315 IPR033905 GO:0004601|GO:0042744
Vvi7g884 361 Gene3D Peroxidase, domain 2 157 297 - -
Vvi7g884 361 SUPERFAMILY Heme-dependent peroxidases 20 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 Pfam Peroxidase 36 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 Gene3D - 23 316 - -
Vvi7g884 361 ProSiteProfiles Plant heme peroxidase family profile. 19 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PANTHER PEROXIDASE 72-RELATED 5 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Vvi7g884 361 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g884 361 PANTHER PEROXIDASE 17 5 318 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g884 K00430 - vvi:100242338 637.876