Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g888 ATGGCGAAGCTGGCCGAGCAAGCCGAGCGCTACGAGGAGATGGTTCAATTCATGGAAAAAGTGACCGCCGAAGCCGAGGAGCTGACCAAGGAGGAGAGCCGTGGCAACGAGGACCACGTGTTTTATTTGAAGATGAAGGGCGATTATCATCGCTATCTGGCTGAGTTCAAGACCGGAGCCGAGAGGAAAGAGGCGGCGGAGAGCACTCTCGCAGCTTATAAATCGGCGCAGGATATTGCAACAGTGGAATTGGCTCCAACCCATCCTATTCGCCTGGGACTTGCACTTAACTTCTCTGTCTTTTACTATGAGATTCTGAATTCCCCGGATCGTGCTTGTAATCTTGCTAAACAGGCTTTTGATGAAGCCATTGCTGAGTTGGATACCCTGGGAGAGGAGTCTTACAAGGACAGCACTTTGATAATGCAGCTTCTTCGTGATAACCTGACTTTGTGGACTTCAGATATGCAGGATGATGGTGGTGATGAGATCAAAGAAGCACCCAAACATGATGAGGAATAG 522 49.43 MAKLAEQAERYEEMVQFMEKVTAEAEELTKEESRGNEDHVFYLKMKGDYHRYLAEFKTGAERKEAAESTLAAYKSAQDIATVELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEIKEAPKHDEE* 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14850172 14852448 + Vvi7g888 Vvi7g888 789754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g888 173 Gene3D - 34 166 IPR036815 -
Vvi7g888 173 Gene3D - 1 33 IPR036815 -
Vvi7g888 173 SUPERFAMILY 14-3-3 protein 1 155 IPR036815 -
Vvi7g888 173 PRINTS 14-3-3 protein zeta signature 37 59 IPR000308 -
Vvi7g888 173 PRINTS 14-3-3 protein zeta signature 72 98 IPR000308 -
Vvi7g888 173 PRINTS 14-3-3 protein zeta signature 99 125 IPR000308 -
Vvi7g888 173 PRINTS 14-3-3 protein zeta signature 126 155 IPR000308 -
Vvi7g888 173 PANTHER 14-3-3 PROTEIN 37 171 IPR000308 -
Vvi7g888 173 PANTHER 14-3-3 PROTEIN 1 32 IPR000308 -
Vvi7g888 173 Pfam 14-3-3 protein 36 153 IPR023410 -
Vvi7g888 173 ProSitePatterns 14-3-3 proteins signature 2. 135 154 IPR023409 -
Vvi7g888 173 PANTHER 14-3-3 PROTEIN 6 37 171 - -
Vvi7g888 173 PANTHER 14-3-3 PROTEIN 6 1 32 - -
Vvi7g888 173 Coils Coil 1 38 - -
Vvi7g888 173 SMART 1433_4 1 166 IPR023410 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g888 Vvi18g412 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g888 K06630 - vvi:100264912 309.686