Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g899 ATGGAGAAAGAGCCAAAAGCTTATGATTGTACTGAGTCACTTCTTGTGAGTTTTGACAAGGTTTACACTCAAACTCAAACTCAGACTCTTGACGCTAATGTCGATCATCAGCAAGCTCTCCACGGTAATTGGGAGTCTTCCTGCTCTTCCATGGTGCAACATCTCAAGGAATGGGACGCCAACTCTTCCTCCACAGAAGCTTGCACTGGTGATGGGTTACTCGCCGGAGTAACACCTCAGCCGCAGGAGCCTGCAGCTACGTCAGGTCGGCGAAAGAGACGACGCACCAGAAGCGTCAAGAACAAAGAACAAGTGGAGAACCAGAGAATGACCCATATTGCAGTTGAACGCAATCGGCGCAGACAGATGAATGAACATCTAGCCGTCCTCCGATCGTTGATGCCTGCATCTTATGTTCAAAGGGGTGACCAAGCTTCAATTATAGGGGGCGCCATAAATTTTGTGAAGGAGCTTGAACAGCTCCTCCAGCCTCTGGAAGCCCAAAAACTAATGAAGCAACGATCCCAAACAGACTCCTCCACTGTCTTCTCCAACTTCTTCACCTTCCCCCAGTACTCCACGTATTCAACTCACTACAACTCCTCTGCGGCAACAAAGGAGTCCATGGCCGAGAAGCGATCCGCCATTGCAGACGTGGAAGTAACAATGGTGGAAACCCACGCAAACATCAGAGTACTATCAAGAACAAGACCAAAACAGCTCTTCAAGATGGTGGCTTGGCTCCACTCCGTCCGCCTTACCATCCTCCACCTCAACGTCACAACAGTGGATCATATGGTCCTCTACTCTTTCAGTGCCAAGGTTGAAGATGATTGCGTGCTGAGTTCCGTGAATGAGATTGCAACTGCAGTGTATGAGACGGTGGGGAGGATCCAAGGAGAGGCTCCGCTTACCTGA 918 49.78 MEKEPKAYDCTESLLVSFDKVYTQTQTQTLDANVDHQQALHGNWESSCSSMVQHLKEWDANSSSTEACTGDGLLAGVTPQPQEPAATSGRRKRRRTRSVKNKEQVENQRMTHIAVERNRRRQMNEHLAVLRSLMPASYVQRGDQASIIGGAINFVKELEQLLQPLEAQKLMKQRSQTDSSTVFSNFFTFPQYSTYSTHYNSSAATKESMAEKRSAIADVEVTMVETHANIRVLSRTRPKQLFKMVAWLHSVRLTILHLNVTTVDHMVLYSFSAKVEDDCVLSSVNEIATAVYETVGRIQGEAPLT* 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15041109 15042602 - Vvi7g899 Vvi7g899 789765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g899 305 Gene3D - 97 182 IPR036638 GO:0046983
Vvi7g899 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 158 IPR011598 GO:0046983
Vvi7g899 305 Pfam Helix-loop-helix DNA-binding domain 108 159 IPR011598 GO:0046983
Vvi7g899 305 MobiDBLite consensus disorder prediction 73 105 - -
Vvi7g899 305 SMART finulus 113 164 IPR011598 GO:0046983
Vvi7g899 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 177 IPR036638 GO:0046983
Vvi7g899 305 CDD bHLH_AtFAMA_like 110 184 - -
Vvi7g899 305 PANTHER TRANSCRIPTION FACTOR BHLH94-LIKE 33 302 - -
Vvi7g899 305 PANTHER MAX DIMERIZATION, MAD 33 302 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15075 PF00010 HLH 3.10E-10 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g899 - - vvi:100260285 551.977