Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g9 | ATGGCGAGCAATCCCTCGGAAGCTCCAGCGGACGATTTTCTCGAGCAAATCCTCGGAATTCCCACCTACCCCGCAGCTGACCCTAATTTGGCTGCTAATGACGTGAATTTGGCCGCTCCTATGGTGCTTCAGCTCGGCTCCGGCGAAGGCTCTGGCCACATCGCCGGCGGGTACCAGGGAACCATGTTTCCGTTAGGGTTGAGGTTGGAGCAGGGAAAGAGCAGCTTTCTGAAGCCCGAAGACGCGTCTGGCAGTGGCAAGCGCTTTCGTGAGGAGGTTATTGATGGTAGAGCTTCTACCGTGAAAAATGCTTTCCATGGTCAACCAATGCAGGCTACCGTTGCTGCAGCACCACATCCTCCTGCAATTCGCCCAAGGGTGCGGGCGAGACGTGGACAGGCCACAGATCCACACAGCATTGCTGAGCGGTTACGCAGAGAAAGAATAGCAGAGAGAATTAGAGCACTGCAGGAACTAGTTCCTAGTGTCAACAAGACGGATAGAGCTGCAATGCTTGATGAAATTGTGGATTATGTGAAATTCCTAAGGCTCCAAGTAAAGGTCTTGAGCATGAGTAGATTGGGCGGAGCTGGTGCAGTTGCACCACTTGTAACAGACATTCCATTAGCATCAGTCGAGGAAGAAGCAAGTGAAGGGGGAAGAAATGAACCGGCATGGGAGAAATGGTCAAACGACGGTACAGAACGACAAGTTGCTAAGCTCATGGAAGAGAATGTTGGGGCTGCAATGCAGTTCCTTCAGTCCAAGGCACTCTGCATCATGCCCATCTCTCTCGCTTCAGCCATTTACCACTCTCAGCAGCCGGACACAACTCCACTGATCAAGCCCCAGACAAATCCCCCATCGTAA | 870 | 52.41 | MASNPSEAPADDFLEQILGIPTYPAADPNLAANDVNLAAPMVLQLGSGEGSGHIAGGYQGTMFPLGLRLEQGKSSFLKPEDASGSGKRFREEVIDGRASTVKNAFHGQPMQATVAAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLASVEEEASEGGRNEPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQQPDTTPLIKPQTNPPS* | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 138159 | 145185 | + | Vvi7g9 | Vvi7g9 | 788875 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g9 | 289 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 7 | 277 | - | - | |
Vvi7g9 | 289 | SMART | finulus | 139 | 188 | IPR011598 | GO:0046983 | |
Vvi7g9 | 289 | PANTHER | TRANSCRIPTION FACTOR UNE12 ISOFORM X1 | 7 | 277 | - | - | |
Vvi7g9 | 289 | Pfam | Helix-loop-helix DNA-binding domain | 138 | 182 | IPR011598 | GO:0046983 | |
Vvi7g9 | 289 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 131 | 192 | IPR036638 | GO:0046983 | |
Vvi7g9 | 289 | Gene3D | - | 128 | 190 | IPR036638 | GO:0046983 | |
Vvi7g9 | 289 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 133 | 182 | IPR011598 | GO:0046983 |
Event-related genes

Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15076 | PF00010 | HLH | 1.00E-07 | No_clan | Vvi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g9 | - | - | vvi:100247732 | 531.176 |