Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g901 ATGATTTTCCTTGGCCTTATAACCTTCTTTGACCCACCCAAGGACTCAGCAAAGCAAGCTCTATGGCGACTGGCCGAGAAGGGAGTAAAAGCGAAAGTGTTAACAGGTGACTCACTGTCCCTAGCAGTAAAGGTTTGTCAGGAAGTTGGTATCAGAACCACCCATGTGATTACTGGACCCGATCTTGAGCTTCTTGATCAGGATTTGTTCCATGAGACCGTTCAAGGGGCAACAGTACTGGCTCGTCTCACCCCCACTCAGAAACTCAGGGTAGTACAGTCCTTGCAGATGGTTGGAAACCATGTTGTTGGGTTCCTGGGTGATGGAATAAATGACTCACTTGCATTGGACGCTGCCAATGTTGGTATATCAGTTGATTCTGGAGTCTCAGTTGCAAAAGACTTTGCTGATATTATATTACTTGAAAAGGACCTGAATGTACTTGTTGCTGGAGTTGAGCGGGGTCGGCTCACCTTTGCAAACACTATGAAGTACATAAAAATGTCAGTTATTGCCAATGTGGGAAGTGTTCTTTCGATCCTTATTGCAACCCTGTTCCTTCGATATGAGCCATTGACTCCTAGGCAGCTCATCACTCAGAACTTCTTGTATAATTTTGGCCAGATCGTTATTCCTTGGGACAAGGTGGAAGAAGATTATGTGAAGACCCCACAGAGCTTTTCCAGGAAAGGCTTACCCATGTTCATTTTGTGGAATGCACCAGTGTGCACCCTCTGTGACTTAGTCACGCTTCTGTTTGTTTACTTCTATTATAGAGCCTACACTGCAAATGATGCTAGATTCTTCCATTCAGCTTGGTTCACTGAAGGGCTTCTCATGCAAACCCTAATTATACATTTGATTCGGACTGAGAAAATTCCCTTCATTCAAGAGGTTGCCTCCTGGCCTGTGATCTGTTCTACTGTCATTGTTTCTGCCATTGGAATCGCAATTCCCTTCACGCCAATTGGGAAAGTCATGGACTTTGTCCGGCTGCCATTTTCATATTATGGGTTTTTGGTTGTACTTTTCATTGGGTATTTTTCTGTTGGCCAGGTGGTTAAGAGAATCTACATTTTGATCTACCACAAATGGCTGTAA 1101 44.05 MIFLGLITFFDPPKDSAKQALWRLAEKGVKAKVLTGDSLSLAVKVCQEVGIRTTHVITGPDLELLDQDLFHETVQGATVLARLTPTQKLRVVQSLQMVGNHVVGFLGDGINDSLALDAANVGISVDSGVSVAKDFADIILLEKDLNVLVAGVERGRLTFANTMKYIKMSVIANVGSVLSILIATLFLRYEPLTPRQLITQNFLYNFGQIVIPWDKVEEDYVKTPQSFSRKGLPMFILWNAPVCTLCDLVTLLFVYFYYRAYTANDARFFHSAWFTEGLLMQTLIIHLIRTEKIPFIQEVASWPVICSTVIVSAIGIAIPFTPIGKVMDFVRLPFSYYGFLVVLFIGYFSVGQVVKRIYILIYHKWL* 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15058883 15059984 - Vvi7g901 Vvi7g901 789767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g901 366 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 77 186 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi7g901 366 PRINTS Magnesium-transporting ATPase signature 164 179 IPR006415 GO:0015444|GO:0015693|GO:0016021
Vvi7g901 366 PRINTS Magnesium-transporting ATPase signature 182 193 IPR006415 GO:0015444|GO:0015693|GO:0016021
Vvi7g901 366 PRINTS Magnesium-transporting ATPase signature 214 227 IPR006415 GO:0015444|GO:0015693|GO:0016021
Vvi7g901 366 PRINTS Magnesium-transporting ATPase signature 234 250 IPR006415 GO:0015444|GO:0015693|GO:0016021
Vvi7g901 366 PRINTS Magnesium-transporting ATPase signature 269 290 IPR006415 GO:0015444|GO:0015693|GO:0016021
Vvi7g901 366 PRINTS Magnesium-transporting ATPase signature 319 340 IPR006415 GO:0015444|GO:0015693|GO:0016021
Vvi7g901 366 PANTHER CATION TRANSPORTING ATPASE 1 365 - -
Vvi7g901 366 SUPERFAMILY Calcium ATPase, transmembrane domain M 155 362 IPR023298 -
Vvi7g901 366 SUPERFAMILY HAD-like 2 153 IPR036412 -
Vvi7g901 366 Gene3D - 1 10 IPR023299 GO:0000166
Vvi7g901 366 Pfam Cation transporting ATPase, C-terminus 190 357 IPR006068 -
Vvi7g901 366 Gene3D - 144 318 - -
Vvi7g901 366 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 1 365 - -
Vvi7g901 366 Gene3D - 11 143 IPR023214 -
Vvi7g901 366 Pfam haloacid dehalogenase-like hydrolase 4 120 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g901 Vvi18g628 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g901 K01531 - vri:117918319 724.161