Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g927 ATGCGCCGCACCAATCAGAAATTGAGAATTGCGGTATTGGTTTCCAAAGCAGCATTTCAATTTATCCAAGGTGTACCTGTCAGCGACTATGTTGTACCTGAGGAAATCAAAGCTGCAGGTTTTCAGATTTGTGCTGATGAATTGGGATCCATTGTCGAAGGCCATGATGTAAAGAAGCTGAAAATTCATGGTGGGGTAGATGGTATTGCAGAAAAGCTATCCACAAGTACAACCAATGGGCTTACTGCCGACAATAAATTGCTGAATCACAGACAAGAGATTTATGGGATAAATAAATTCACTGAAACTCAAGCTCGAGGCTTCTTGGTATTTGTTTGGGAAGCCCTTCATGACATGACACTCATAATCCTTGCTGTGTGTGCGCTTGTGTCTCTGATAGTTGGCATTGCAATGGAAGGGTGGCCGGTGGGGGCCCATGATGGCCTTGGGATTGTTGCTAGTATCTTGTTGGTTGTGTTAGTCACGGCAACAAGTGATTATCGGCAATCTTTACAGTTTAGGGATTTGGACAAAGAGAAGAAGAAGATCTCCATTCAGGTCACAAGGAATGGATATAGGCACAAAATGTCGATATATGATTTGCTTCCTGGTGATATTGTGCATCTTTCTATTGGAGACCAGGTCCCTGCTGATGGACTTTTTGTTTCAGGATTTTGTGTGTCAATTGATGAATCAAGTTTAACTGGAGAGAGTGAACCGGTAATGGTAAGTGCAGAAAATCCTTTTCTGCTGTCTGGAACTAAGGTTCAAGATGGATCATGCAAGATGATGATTACTACTGTTGGAATGAGAACCCAATGGGGTAAATTGATGGCCACTCTTAGTGAAGGGGGAGATGACGAGACCCCATTGCAAGTTAAATTGAATGGAGTGGCAACGGGAATTCATTCCATTATCTTTATTATTTTGGCATCTATTAGAGATGTGTATAGCTTAGATATAAATAAAAGTCATTGCTTGATACAATCTACAAATTCTCATTGTTTGCACTTCCTCCATTGTGAACAGTACCAAATTCTAATTAATTCTGCCCATGAACTTCAGGTGGCTAAAGAGAGTGCTGATGTAATAATCTTGGATGATAATTTCTCCACAATTGCGACTGTGGCCAAATGGGGACGTTCAGTCTACATAAATATTCAAAAATTTGTACAGTTCCAACTTACGGTTAACGTGGTTGCATTAATAGTCAACTTCTCTTCAGCTTGTTTGACAGGAAATGCTCCCCTCACGGCTGTTCAGCTTCTGTGGGTCAACATGATCATGGATACACTGGGAGCTCTTGCATTAGCAACCGAGCCACCTACTGATGACTTAATGAAGAGAGCACCAGTTGGAAGAAGAGGAAATTTTATCAGTAATGTCATGTGGAGAAATATCCTAGGCCAGTCCCTATATCAGTTTCTGGTAATATGGTATCTTCAGGTAGAAGGGAAAGCAATATTTCAGCTCAATGGCCCTGATTCTGATCTGATCCTGAATACACTTATTTTCAACTCGTTTGTCTTCTGCCAGGTTTTCAATGAGATAAGCTCCCGAGAAATGGAGAAAATCAATGTATTCAAAGGCATACTGGATAACTATGTATTTGCTGCTGTTCTCACTTCCACTGTCCTTTTCCAGATCATAATCATCGAGTACCTGGGTACATATGCAAACACATCACCTCTCACTCTATCTCAATGGTTCCTCAGTGTTTTTATTGGGTTCCTAGGCATGCCAATCGCTGCGGCCTTAAAGATGATCCCTGTGGCAAGTCAATGA 1785 41.34 MRRTNQKLRIAVLVSKAAFQFIQGVPVSDYVVPEEIKAAGFQICADELGSIVEGHDVKKLKIHGGVDGIAEKLSTSTTNGLTADNKLLNHRQEIYGINKFTETQARGFLVFVWEALHDMTLIILAVCALVSLIVGIAMEGWPVGAHDGLGIVASILLVVLVTATSDYRQSLQFRDLDKEKKKISIQVTRNGYRHKMSIYDLLPGDIVHLSIGDQVPADGLFVSGFCVSIDESSLTGESEPVMVSAENPFLLSGTKVQDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATGIHSIIFIILASIRDVYSLDINKSHCLIQSTNSHCLHFLHCEQYQILINSAHELQVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRAPVGRRGNFISNVMWRNILGQSLYQFLVIWYLQVEGKAIFQLNGPDSDLILNTLIFNSFVFCQVFNEISSREMEKINVFKGILDNYVFAAVLTSTVLFQIIIIEYLGTYANTSPLTLSQWFLSVFIGFLGMPIAAALKMIPVASQ* 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15390643 15395837 + Vvi7g927 Vvi7g927 789793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g927 594 Pfam Cation transporting ATPase, C-terminus 415 589 IPR006068 -
Vvi7g927 594 PANTHER CATION TRANSPORTING ATPASE 355 592 - -
Vvi7g927 594 PANTHER CATION TRANSPORTING ATPASE 2 305 - -
Vvi7g927 594 Pfam Cation transporter/ATPase, N-terminus 64 131 IPR004014 -
Vvi7g927 594 SUPERFAMILY Calcium ATPase, transduction domain A 185 279 IPR008250 -
Vvi7g927 594 Gene3D - 157 257 - -
Vvi7g927 594 SUPERFAMILY Calcium ATPase, transmembrane domain M 63 590 IPR023298 -
Vvi7g927 594 SMART Cation_ATPase_N_a_2 62 136 IPR004014 -
Vvi7g927 594 Pfam E1-E2 ATPase 183 311 - -
Vvi7g927 594 Gene3D - 258 591 - -
Vvi7g927 594 PANTHER CALCIUM-TRANSPORTING ATPASE 2 305 - -
Vvi7g927 594 PANTHER CALCIUM-TRANSPORTING ATPASE 355 592 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g927 Vvi18g653 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g927 K01537 - vvi:100854234 585.874