Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g937 ATGAGACTTGTTTGTTTCTACCTCTTTTTCGTTCTTCTTCTATCATTCTCACTTCATACTGCTGCTACTGCTCTTAGCCAAAGAAGAATTCTGCATCAGCCCTTATTTCCAGACAGTTCGCCGCCCCCTGGTGCAGATTCTCCGCCGCCTCCACCGCCTGACAGTCAGGTTTTTCCTAATCCCGACCAGCCATTCTTCCCGGAGGTTCCCACCGGACCCACTACCGATGCCAGCCAGCCTCCCCCTGCGACTACCAATGGCACAGCCCCAATTCCCACCGCAACTCAACCCACCAAGCCTACTAAGAAAGTGGCCATTGCGATATCGGTTGGGATCGTCACACTTGGGATGTTATCGGCGCTGGCTTTCTTCTTGTATCGCCACCGAGTGAAGCATCCTGGCGAGTCACAGAAGCTTGTCGGTGGGGGTTCGCAGAGTTTTCAGGAGGAATCGAGAGTGCCGCCGTCGAGTTTTCTGTACATTGGGACGGTGGAGCCGTCGAGAAGATCGGGCAATGAGGCGAATGGTGCCAATGGAACAAATGGATCGCCTTATCATAAGCTGAATTCGATTAAAAGATCGGATCGGTATCGGCCTAGTCCAGAGCTGCAGCCACTGCCACCACTGAACAACCCTCCGGTCAGAAATAATTCACCTCAGGCTATGTCGTGGTCGGATGAGGAGGGTCATGAGACAGTCTTCTACACGCCGCAAGCCTCCTCCATCGGCAATGACGAAGGCTTTTACACTCCGGTTTCACGACAGAATAGTAATTCGATCAACAGCAGCTCTGCAACTCCTGCGAAAACTGAATCTCATGGTACCAGTCCAGTTCCTCATTCTAAGAGGACCTCTCCCAAATCGCGGCGTTCAGCTTCTGCTCAATCTAGTCAACTAGCAATTGCACACACCCCTAAAAGGCCAAAGTTTTCGACACCTCCACCCCCACCGAATGTGGCGCGACTTCAGGCATTGACCAACCAATTCACAGAGACATCCACAATCCCAGCTCCGCCTCCTCCTCCACCTCCTCCACCACTAACAACACCCAGGAAATCGGGGAGTTCGGAATCAAGTGTCCCCCTGATTCCATCTGAAGTATTGACAACTCCACAATCTCGAATTCTTAAAACAAACTCCACTCCTGGGAATGAGATGACAAAACCCCTTGAAAATGGCAGTGGAGGCGCAAGTTCTTCTGGGAGGCTTGATGCTGATGATGTGGATGGAGCGAAACCCAAGCTTAAGCCTCTGCACTGGGACAAAGTACGGGCAACTTCGGATAGAGCCACAGTGTGGGACCAACTGAAATCGAGCTCCTTTCAATTAAATGAGGACATGATGGAGACTCTCTTTGGCTGCAATTCCGCGGTTTCTATTCCCAAAGAAGCAACTAGAAAATCAGTTCTCCCCCCTGTTGAGCAGGAGAACAGAGTGTTGGATCCAAAGAAGTCACAGAACATAGCTATTTTGTTAAGGGCATTGAATGTGACACGAGATGAGGTTTCCGAAGCTCTTTTGGATGGTAACCCAGAAAGCTTGGGTGCTGAGCTTTTGGAAACTTTAGTAAAGATGGCTCCCACCAAGGAGGAAGAAATAAAACTTCGAGATTACAGTGGTGACATCTCGAAACTAGGAACTGCAGAACGATTTCTCAAAGCAGTACTCGATATCCCATATGCATTCAAAAGAGTTGAAGCCATGCTATACAGAGCCAATTTTGATACAGAAGTAAAATACCTGAGGAAGTCCTTTCAAACCCTAGAGGCAGCAAGTGAGGAATTGAAGAACAGCCGCCTGTTCCTTAAACTCCTTGAAGCTGTTCTCAGGACAGGAAATCGAATGAATGTTGGCACCAACAGGGGTGATGCTAGAGCTTTTAAACTCGACACACTCTTGAAATTAGTAGACATAAAGGGAACAGATGGTAAGACAACGTTGCTCCACTTTGTGGTGCAAGAGATTATCAGGTCTGAAGATGGAGGTTCTGATCCTACCAATGAGAATCTTCAAACCAAGTCACAAACTAAAATGGAGGATGACTTCAAGAAGCAAGGATTGCAGGTTGTGGCTGGGCTGAGCCGGGACCTCGGCAATGTGAAAAAAGCAGCAGGAATGGACTCAGATGTCTTAAGCAGCTATGTGTCTAAACTTGAAGTAGGCCTTGAAAAAGTGAAATTGGTTTTGCAATATCAGAAGCCAAATGTCACAGGGAAATTCTTCGACTCAATGAAGCTGTTTCTTAAAGAGGCTGAAGAAGAAATCATCAAGATTAAGACCGATGAAAGAAAGGCACTATTGCTTGTGAAAGAGGCCACAGAATATTTTCATGGTGATGCAGCAAAGGAAGAAGCCCATCCTTTCAGAATCTTCATGATCGTAAGAGATTTTCTCTCCATATTGGATCAAGTGTGCAAGGAAGTGGGAAGGATGCAGGACAGAACAATGGTGGGTTCTGCTAGATCCTTCCGGATATCTGCAACTGCTTCACTGCCAGTTCTCAGCAGGTACAATGTGAGACAAGATACAAGTTCAGACGAGGAAAGCTCATCTCCATGA 2559 47.67 MRLVCFYLFFVLLLSFSLHTAATALSQRRILHQPLFPDSSPPPGADSPPPPPPDSQVFPNPDQPFFPEVPTGPTTDASQPPPATTNGTAPIPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYRHRVKHPGESQKLVGGGSQSFQEESRVPPSSFLYIGTVEPSRRSGNEANGANGTNGSPYHKLNSIKRSDRYRPSPELQPLPPLNNPPVRNNSPQAMSWSDEEGHETVFYTPQASSIGNDEGFYTPVSRQNSNSINSSSATPAKTESHGTSPVPHSKRTSPKSRRSASAQSSQLAIAHTPKRPKFSTPPPPPNVARLQALTNQFTETSTIPAPPPPPPPPPLTTPRKSGSSESSVPLIPSEVLTTPQSRILKTNSTPGNEMTKPLENGSGGASSSGRLDADDVDGAKPKLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSAVSIPKEATRKSVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPESLGAELLETLVKMAPTKEEEIKLRDYSGDISKLGTAERFLKAVLDIPYAFKRVEAMLYRANFDTEVKYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDARAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEDGGSDPTNENLQTKSQTKMEDDFKKQGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEVGLEKVKLVLQYQKPNVTGKFFDSMKLFLKEAEEEIIKIKTDERKALLLVKEATEYFHGDAAKEEAHPFRIFMIVRDFLSILDQVCKEVGRMQDRTMVGSARSFRISATASLPVLSRYNVRQDTSSDEESSSP* 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15484124 15494123 - Vvi7g937 Vvi7g937 789803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g937 852 ProSiteProfiles Formin homology-2 (FH2) domain profile. 405 827 IPR015425 -
Vvi7g937 852 MobiDBLite consensus disorder prediction 165 413 - -
Vvi7g937 852 MobiDBLite consensus disorder prediction 234 302 - -
Vvi7g937 852 MobiDBLite consensus disorder prediction 78 100 - -
Vvi7g937 852 PANTHER FORMIN-LIKE PROTEIN 6 8 852 - -
Vvi7g937 852 Pfam Formin Homology 2 Domain 410 801 IPR015425 -
Vvi7g937 852 Gene3D Formin, FH2 domain 405 813 IPR042201 -
Vvi7g937 852 MobiDBLite consensus disorder prediction 334 350 - -
Vvi7g937 852 SMART it6_source 405 816 IPR015425 -
Vvi7g937 852 MobiDBLite consensus disorder prediction 36 68 - -
Vvi7g937 852 PANTHER FORMIN-RELATED 8 852 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vvi7g937 852 MobiDBLite consensus disorder prediction 351 399 - -
Vvi7g937 852 MobiDBLite consensus disorder prediction 168 188 - -
Vvi7g937 852 MobiDBLite consensus disorder prediction 34 100 - -
Vvi7g937 852 SUPERFAMILY Formin homology 2 domain (FH2 domain) 336 814 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g937 - - vvi:100249049 1463.36