Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g951 ATGGGTCGATTCCCTCTTCTCGCTATAGCCATGTGGTCGCTTTCTCTTAGTGTATGTGTCTTCCCCGACACCGCATCCGCCCAACTCAAACAAAACTACTATGCCAACATCTGCCCCAATGTCGAAAACATCGTTAGAGGCGTTGTTAATACGAAATTTAAACAAACCTTTGTCACAGTTCCTGCAACTCTCCGTCTCTTCTTCCATGACTGCTTTGTCCAGGGTTGTGATGCTTCGGTTATAATTTCCTCCACCGGAAGCAACACAGCAGAGAAGGATCACCCTGATAATCTGTCCTTGGCTGGAGATGGATTCGACACGGTGATCAAAGCCAAAGCGGAAGTGGATAAAAACCCAACGTGCAGGAACAAGGTCTCATGTGCTGATATTCTCACCATGGCCACCCGAGATGTCATTGCTCTGTCAGGTGGACCTTCATATGCAGTGGAGCTAGGAAGATTGGATGGGCTGAGCTCAACTTCTGCTAGCGTAAATGGAAAACTTCCTCAGCCAACCTTTAATTTAGATAAGCTCAACTCCTTGTTTGCCGCCAAAGGCCTCAGTCAGACAGACATGATTGCTCTCTCAGCGGCCCACACCCTTGGATTCTCCCACTGCAGCAAGTTCGCCAACAGGATATACAATTTCAGCCCAGGGAAAGGGTCTCTTCACCTCCGACGAGGTCTTGTTCACGGACTCAAGGTCCAAGCCCACTGTTAA 720 48.75 MGRFPLLAIAMWSLSLSVCVFPDTASAQLKQNYYANICPNVENIVRGVVNTKFKQTFVTVPATLRLFFHDCFVQGCDASVIISSTGSNTAEKDHPDNLSLAGDGFDTVIKAKAEVDKNPTCRNKVSCADILTMATRDVIALSGGPSYAVELGRLDGLSSTSASVNGKLPQPTFNLDKLNSLFAAKGLSQTDMIALSAAHTLGFSHCSKFANRIYNFSPGKGSLHLRRGLVHGLKVQAHC* 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15621174 15622997 - Vvi7g951 Vvi7g951 789817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g951 239 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Vvi7g951 239 CDD secretory_peroxidase 28 221 IPR033905 GO:0004601|GO:0042744
Vvi7g951 239 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 PANTHER PEROXIDASE 7 218 - -
Vvi7g951 239 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 PANTHER - 7 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 SUPERFAMILY Heme-dependent peroxidases 28 219 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 Pfam Peroxidase 46 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 ProSiteProfiles Plant heme peroxidase family profile. 28 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g951 239 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Vvi7g951 239 Gene3D Peroxidase, domain 2 169 220 - -
Vvi7g951 239 Gene3D - 32 168 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g951 K00430 - vvi:100266458 435.647