Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g966 ATGAGAGAGATTTTGGAGTCGTGTTGCAGACCATTGGAGAGGTGTTTCAAGGCAGGTGGTGGAGATGAGCTTCTATGGCACTTGGATTTGAAGCCACATGCATCTGGGGACTATTCGATTGCAGTAGTGCAAGCCAACTCGTCGCTGGAAGACCAAAGCCAGATCTTCACTTCCCCTTCAGCCACATACATCGGTGTCTACGACGGCCACGGCGGTCCTGAAGCCTCTCGCTTTATTACCAACCACATCTTCCCTTTTCTACATAAGTTCTCGTCTGAACAAGGGGGGTTATCTGCGGAAGTGATAAAAAAGGCGTTTAATGCCACTGAAGAGGAATTCTTGCATTTAGTGAAGCAGTCATGGCTAGCTAGGCCCCAGATTGCATCTGTGGGTTCGTGCTGTCTGGTTGGGGCAATTTCGAATGATGTATTGTATGTAGCAAATCTCGGGGACTCAAGGGCAGTCCTTGGGCGGAAAGTCACAGGAGGGAGGATGAATAGCAGTCAGATGGTGGTGGCGGAGCGATTATCAACTGATCATAATGTTGGAGTTGAGGAGGTGAGGAAGGAGGTGGCAGCCCTTCACCCTGATGATGCCCACATTGTGGTGTATACTCGAGGAGTTTGGCGCATTAGGGGCATTATTCAGGTCTCAAGATCAATAGGAGATTTCTATCTAAAGAAACCCGAATTGAGTAGAGATCCTCTTTTTCAACAATTTGGATCACCTATTCCTTTGAAAAGACCAGTAATGACAGCAGAACCCTCGATAGTAATTAGAAATTTAAAGCCGCACGACTTGTTCTTGATATTTGCATCAGATGGCCTTTGGGAGCAGTTAAGTGATGAAGCAGCTGTTGAAATCGTCTTAAAAAATCCAAGAATTGGAATAGCAAAACGACTAGTGAGAGCTGCCCTTCAGCAAGCAGCAAGGAAAAGAGAAATGAGATATGACGACATAAGAAGAATTGAAAAAGGGGTGAGGCGCCATTTCCATGATGACATCACTGTAATTGTGATGTACCTTGATCATGCACAAGGCTCTCCAAATGGGAGACTCAAGGATCATGGCATTGTTGACTGCACCAGTGCCCCAGCTGACATCTTCTCTCTTAATTCAGATGAAACCCACAACCGATTTCCCATTGTTCACTAG 1155 46.06 MREILESCCRPLERCFKAGGGDELLWHLDLKPHASGDYSIAVVQANSSLEDQSQIFTSPSATYIGVYDGHGGPEASRFITNHIFPFLHKFSSEQGGLSAEVIKKAFNATEEEFLHLVKQSWLARPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRKVTGGRMNSSQMVVAERLSTDHNVGVEEVRKEVAALHPDDAHIVVYTRGVWRIRGIIQVSRSIGDFYLKKPELSRDPLFQQFGSPIPLKRPVMTAEPSIVIRNLKPHDLFLIFASDGLWEQLSDEAAVEIVLKNPRIGIAKRLVRAALQQAARKREMRYDDIRRIEKGVRRHFHDDITVIVMYLDHAQGSPNGRLKDHGIVDCTSAPADIFSLNSDETHNRFPIVH* 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15744813 15748842 + Vvi7g966 Vvi7g966 789832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g966 384 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 6 377 - -
Vvi7g966 384 SUPERFAMILY PP2C-like 43 343 IPR036457 -
Vvi7g966 384 PANTHER ALPHABET, ISOFORM E-RELATED 6 377 - -
Vvi7g966 384 Pfam Protein phosphatase 2C 59 311 IPR001932 -
Vvi7g966 384 Gene3D - 29 348 IPR036457 -
Vvi7g966 384 CDD PP2Cc 44 342 IPR001932 -
Vvi7g966 384 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Vvi7g966 384 ProSiteProfiles PPM-type phosphatase domain profile. 37 342 IPR001932 -
Vvi7g966 384 SMART PP2C_4 27 340 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g672 Vvi7g966 ECH
Vvi7g966 Vvi18g675 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g966 - K01102 vvi:100254308 764.222