Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g984 ATGGAAATTACATGGCTAAGCACATCTCTATGTCTTCTCTTTCTCTCGTTTGCTTTCAATATCTTCCTCCAAAGAAGAAGAATACATCCCCACCTCCCACCAAGCCCGCCTGCTATTCCGATTCTTGGTCACCTCCATCTCCTCCTTAAACCACCAATTCATCGGCAATTACAAAGTCTTTCTAAAAAATATGGTCCTATCTTCTCCCTTCGCTTCGGATCCAGTCCTGTTGTTATCATATCCTCTCCGTCCACTGTTGAAGAATGTTTCACTAAGAACGACATCATTTTTGCCAACCGGCCTCGCTGGCTGATCGGCAACGCACTGGAAATCTTCTCCTCAAATCGCCTCAACATGTTTCTAGGCACTCGCAGGGATGAAATCAAGATTTTACTACACCGATTGTACTATGGGGAAGATGTGGATAGTGAGGAAGCCAAGCGTTTTCAGAAAATAATGAGAGGGATTTTTGAACTGGCTGGGGCATCAAATCCAGGAGATTTTTTGCCTTTACTACGGTGGGGTCTAGTGAATAAAAACAGCATGATCGATCATCTGCTTTCACTGCAAAAATCAGAACCAGAATATTACACAGACGAAATCATAAAAGGGCTTGCACTGATCTTAACTTTTGCTGGTACTGACACTACTGCGACGACAATAGAATGGGCTATGTCTCTTCTACTCAATCATCCTGATGTTCTGAAGAAAGCTAGAGCAGAATTGGACACTCATGTTGGAAAAGATCGTTTGATGGAAGAATCAGACTTCCCCAAATTACAATATCTTCGAAGTATCATTTCTGAGACGTTAAGATTGTTTCCGGCTACCCCACTCTTGATACCACATATTTCTTCAGACAATTGCCAAATTGGAGGATATGATATCCCAAGAGGCACAATATTATTGGTCAATGCTTGGGCCATTCACAGAGACCCTAAGTCGTGGAAAGATGCTACAAGTTTCAAGCCAGAGAGGTTCGAAAATGGGGAAAGTGAGGCATACAAGCTATTGCCATTTGGCTTCGGAAGAAGGGCTTGCCCTGGTGCTGGCCTGGCTAATCGAGTGATAGGTTTGACTTTGGGGTTATTGATTCAGTGTTATGAGTGGGAGAGAGTTAGTGAGAAGGAAGTTGACATGGCTGAAGGGAAAGGAGTCACCATGCCCAAATTAGAGCCATTGGAAGCCATGTGTAAAGCTCGTGCTATTATCAGAAAGGTATTATAA 1227 43.19 MEITWLSTSLCLLFLSFAFNIFLQRRRIHPHLPPSPPAIPILGHLHLLLKPPIHRQLQSLSKKYGPIFSLRFGSSPVVIISSPSTVEECFTKNDIIFANRPRWLIGNALEIFSSNRLNMFLGTRRDEIKILLHRLYYGEDVDSEEAKRFQKIMRGIFELAGASNPGDFLPLLRWGLVNKNSMIDHLLSLQKSEPEYYTDEIIKGLALILTFAGTDTTATTIEWAMSLLLNHPDVLKKARAELDTHVGKDRLMEESDFPKLQYLRSIISETLRLFPATPLLIPHISSDNCQIGGYDIPRGTILLVNAWAIHRDPKSWKDATSFKPERFENGESEAYKLLPFGFGRRACPGAGLANRVIGLTLGLLIQCYEWERVSEKEVDMAEGKGVTMPKLEPLEAMCKARAIIRKVL* 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15965560 15967356 + Vvi7g984 Vvi7g984 789850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g984 408 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 136 175 - -
Vvi7g984 408 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 180 405 - -
Vvi7g984 408 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 135 - -
Vvi7g984 408 Pfam Cytochrome P450 178 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 Pfam Cytochrome P450 33 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 340 349 IPR017972 GO:0005506|GO:0016705
Vvi7g984 408 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 PRINTS E-class P450 group I signature 305 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 PRINTS E-class P450 group I signature 337 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 PRINTS E-class P450 group I signature 347 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 SUPERFAMILY Cytochrome P450 33 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 PANTHER CYTOCHROME P450 FAMILY PROTEIN 136 175 - -
Vvi7g984 408 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 135 - -
Vvi7g984 408 PANTHER CYTOCHROME P450 FAMILY PROTEIN 180 405 - -
Vvi7g984 408 PRINTS P450 superfamily signature 212 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 PRINTS P450 superfamily signature 265 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 PRINTS P450 superfamily signature 338 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g984 408 Gene3D Cytochrome P450 19 404 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g984 K13260 - vvi:100261095 724.546