Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7randomg13 ATGGCCAGAGAAATCAAAACAGGAGAAATTGTTGCCTTAAAAAGGATACGCATGGAAAATGAAAGAGAAGGGTTTCCTATAACTGCTATCCGGGAAATTAAAATTCTAAAGAAGCTACATCACGAAAATGTTCTAAAACTGAAAGAGATTGTAACGTCTCCAGGTCGTGAGAAGGATGAGCAGGGGCATCCTGATGGTAATAAATACAGAGGTGGCATCTACATGGTTTTTGATTACATGGACCATGATTTAGCAGGCCTGTCTGATCGTCCTGGACTGAGATTTTCAATTCCTCAGGTCAAGTGTTATATGAAGCAGTTACTGACTGGGCTTCACTACTGTCACGTCAATCAAGTACTTCACAGGGACATCAAAGGTGCCAATCTTCTTATAAATAATGAGGGAATTTTAAAGCTTGCTGATTTTGGACTTGCACGGTCATTTTCCAGTGACCATAATGGAAATCTTACAAATCGTGTTATTACTTTGTGGTATAGGCCACCAGAATTGCTGCTAGGAGCCACAAAGTATGGCCCTGCTGTTGACATGTGGTCCGTCGGTTGTATCTTTGCTGAGCTTTTGTATGGAAAACCAATTTTGAATGGGAATAATGAGGTTAGATATGTAATCTTTTCTATGGTGATGGTAAATTCTTTTTGTCAAATATCTCCAGGCTCATTTTGGTTGACCACCACCACAGAACGCAATTTT 711 39.94 MAREIKTGEIVALKRIRMENEREGFPITAIREIKILKKLHHENVLKLKEIVTSPGREKDEQGHPDGNKYRGGIYMVFDYMDHDLAGLSDRPGLRFSIPQVKCYMKQLLTGLHYCHVNQVLHRDIKGANLLINNEGILKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLYGKPILNGNNEVRYVIFSMVMVNSFCQISPGSFWLTTTTERNF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7randomg13 237 Pfam Protein kinase domain 2 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7randomg13 237 SUPERFAMILY Protein kinase-like (PK-like) 2 214 IPR011009 -
Vvi7randomg13 237 Gene3D Transferase(Phosphotransferase) domain 1 82 234 - -
Vvi7randomg13 237 PANTHER CYCLIN-DEPENDENT KINASE C-2 1 206 - -
Vvi7randomg13 237 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7randomg13 237 PANTHER CELL DIVISION PROTEIN KINASE 1 206 - -
Vvi7randomg13 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Vvi7randomg13 237 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Vvi7randomg13 237 SMART serkin_6 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76779 PF00069 Pkinase 4.10E-55 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7randomg13 K08819 - vvi:100854820 423.32