Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7randomg3 ATGCAAACCAAGGAAATAAAATTCCTGCAGGCCGGCCAAACAGTAGGTAAGGAAGGGGAGGAGGAAGGGGAAAAGAATTGCGAAGTCAGAAAAACAAACAGAATTCGCGATTCCTACCTCATACCGACTTTCTCCCTAAGGTTGGATGTTGAGAAAGTGAAGAAAGCACTAGAGGTTAGTGGTGGTGGTGGTGGCGGCTACCAGATTTTCATGGACAAGTTGTGTTGCTTTAATTCTCAGCATGGAGGACGAGGTTCCAGTAGCTCTGGTAAGGGCAGAAGCCCTCAAGGCCCAATAAAATATGGATTTAGCCTAGTAAAAGGGAAGGCGAATCATCCTATGGAGGATTATCATGTTGCTAAGTTTCATCATACCAAAGGACATGAGCTTGGACTATTTGCTATTTATGATGGCCATATGGGAGATAGCGTGCCAGCCTACCTACAGAAGCATTTGTTTTCCAATATTTTAAAGGAGGAGAATTTCTGGACTGATCCTCATGGTTCCATTTCAAAAGCCTACGAGAGGACTGACCAGGCAATTCTTTCTCATAGTCGAGACTTGGGGCGAGGTGGATCTACTGCTGTTACTGCAATTCTTATAAATGGCCGAAAGTTATTAATCGCAAATGTTGGTGATTCAAGAGCAGTTCTCTCAAGAGGGGGTCAAGCAATACAAATGACGATTGATCATGAGCCCAACAGAGAGCGAGGCAGTATTGAGAACAAAGGTGGATTTGTCTCGAATATACCAGGAGATGTCCCAAGAGTTAATGGCCAGTTGGCAGTGTCTCGTGCTTTTGGAGACAAGAGCCTGAAATCACACCTACGATCAGATCCAGACATACGACATACTGATATTGATCCCAATTGTGAGATTCTTATTCTTGCAAGTGATGGTTTATGGAAGGTCATGGATAATCAAGAGGCAGTTGACATTGCAAGAAAGATCAAGGATCCACAGAAAGCTGCTAAGCACCTAACGGCTGAAGCATTACGCAGAGAATGTAAAGATGATATATCTTGTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATAATTCACCCAGATGCTGGGTATTTTTTATTTTTGTTTCTGGAAAGTTGCTCTACATTGGATGA 1197 39.35 MQTKEIKFLQAGQTVGKEGEEEGEKNCEVRKTNRIRDSYLIPTFSLRLDVEKVKKALEVSGGGGGGYQIFMDKLCCFNSQHGGRGSSSSGKGRSPQGPIKYGFSLVKGKANHPMEDYHVAKFHHTKGHELGLFAIYDGHMGDSVPAYLQKHLFSNILKEENFWTDPHGSISKAYERTDQAILSHSRDLGRGGSTAVTAILINGRKLLIANVGDSRAVLSRGGQAIQMTIDHEPNRERGSIENKGGFVSNIPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRHTDIDPNCEILILASDGLWKVMDNQEAVDIARKIKDPQKAAKHLTAEALRRECKDDISCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNSPRCWVFFIFVSGKLLYIG* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7randomg3 398 SUPERFAMILY PP2C-like 97 343 IPR036457 -
Vvi7randomg3 398 ProSiteProfiles PPM-type phosphatase domain profile. 100 347 IPR001932 -
Vvi7randomg3 398 Pfam Protein phosphatase 2C 109 340 IPR001932 -
Vvi7randomg3 398 SMART PP2C_SIG_2 116 347 IPR001932 -
Vvi7randomg3 398 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 77 344 - -
Vvi7randomg3 398 Coils Coil 343 343 - -
Vvi7randomg3 398 Gene3D - 97 350 IPR036457 -
Vvi7randomg3 398 PANTHER PROTEIN PHOSPHATASE 2C 77 344 IPR015655 GO:0004722|GO:0006470
Vvi7randomg3 398 SMART PP2C_4 96 345 IPR001932 -
Vvi7randomg3 398 CDD PP2Cc 99 343 IPR001932 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7randomg3 K17506 - vvi:100254745 537.724