Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1017 ATGGGAGACCTTCCTAAAACTGGAGCTGTCACCGCCGCAGACCACCACAGCCTGCTTTCGGCAGTTGTCGGAAGTGACAGAATGGCCAGAGACTCCACAATCCACAGTTATGGAAGGAGCTTCAATGGTTTTGCAGCGAGGTTGTTACCACATGAAGCAAAGATTCTCTCTGAGAAAGAGGGTGTTGTATCGGTGTTTCCAAACACTATGCGCAAACTTCACACGACAAGATCATGGGATTTCTTAGGAATGCGTGAAAAGATGAAGAAAAGGAACCCCAAAGCAGAGATCAATATGGTCATTGGTTTGCTAGATACAGGAATTTGGATGGACTGCCCCAGTTTCAAAGATAAAGGATATGGGCCCCCCCCAACCAAGTGGAAGGGCAAATGTAGCAACTCCTCAGGCTTCACTGGATGTAACAACAAGGTCATCGGTGCAAAGTACTATGATCTGGACCACCAACCCGGTATGTTGGGTAAAGATGACATACTATCACCGGTCGACACGGATGGGCATGGCACACACACGGCCTCCACAGCTGCTGGAATAGTAGTAAAAAATGCCAGCTTGTTTGGCGTAGGTAAAGGGACAGCCCGAGGAGGGGTGCCATTAGCACGTATCGCCATGTATAAAGTATGTTGGTATACTGGCTGCTCTGACATGAATCTCCTAGCGGGGTTTGATGATGCCATTGCGGATGGGGTTGATGTGTTATCGGTGTCCATTGGGGGAACTGTTGGACCATTTTTTGAAGACCCCATAGCCATTGGAGCTTTTCATGCCATGAGAAGGGGAGTCCTCGTATCTAGCTCGGCTGGGAATGATGGGCCTTTGGAAGCAACCGTCCAGAACGTTGCGCCCTGGATACTGACTGTAGGTGCTACTGGTCTTGACAGGGAGTTCCGGAGTCAAGTCAAGTTGGGCAATGGCATGAAAGCTTCTGGAGTTTCAGTGAACACATTTTCACCAAGGAAAAAAATGTACCCTCTAACTAGTGGAACCTTAGCATCCAATTCCAGTGGAGCATACTGGGGAAATGTCAGTGCTTGTGACTGGGCTAGTTTAATCCCAGAGGAGGTGAAGGGAAAGATTGTGTACTGCATGGGAAATAGAGGTCAAGATTTCAACATCAGGGACCTTGGTGGGATCGGCACAATCATGTCGCTTGATGAGCCAACAGACATTGGCTTTACCTTTGTCATCCCATCAACCTTTGTCACCAGCGAGGAAGGAAGAAAGATAGACAAATATATCAACTCTACCAAGTATGCTCAGGCAGTTATATACAAGTCAAAAGCTTTTAAAATAGCTGCCCCATTCGTGAGTTCTTTCTCATCTAGGGGACCCCAAGATCTCAGTCCCAACATCCTCAAGCCTGATATTGTTGCACCGGGGCTGGACATATTAGCTGGTTACTCAAAGCTAGCACCTATATCAGGGGATCCAGAGGACAGGCGGTTTGCAAATTTCAACATTTTAACGGGAACATCTATGTCTTGCCCTCATGTAGCAGCTGCTGCTGCGTATGTTAAATCCTTCCACCCGAAATGGTCACCAGCTGCAATCAAGTCTGCACTCATGACCACAGCCACAACTCTGAAGATCAAGGACAATGCACTAGGATCAGGCTCCGGTCAATTAAACCCAAGAATCGCAGTGCACCCTGGCCTAGTCTACGACATCCCCACAAGTGGATACATCCGTTTCCTGTGCAAGGAAGGCTATAATAGCACAACCATCGGTCTACTCACAGGTGGAAAGCAGAAATACAAGTGCTCCAATTTCAGGCCTGCACTGGGATCAGATGGTCTCAACTATCCTTCCATGCATCTCCAAATTAAGGACCCAACGGCTAGATTCTCAGCAGTCTTCTATCGAACAGTAACCAGTGTAGGGCATGGAGCCTCTGTGTACAAGGCAACTGTGAAAGCAACCAAGGGTCTTTCAGTTAGAGTTGTTCCCAATACTTTGTCATTTCAAAAGGCGCATCAGCGGAGGTCTTTCAAGATTGTGTTGAAGGGAAAGCCTAACAACTCTCGGATTCAATCAGCATTTCTGGAATGGAGTGACTCTAAGCACAAAGTCAAGAGTCCTATCCTCGTTTACCGGCAGTCAATTTAG 2124 47.55 MGDLPKTGAVTAADHHSLLSAVVGSDRMARDSTIHSYGRSFNGFAARLLPHEAKILSEKEGVVSVFPNTMRKLHTTRSWDFLGMREKMKKRNPKAEINMVIGLLDTGIWMDCPSFKDKGYGPPPTKWKGKCSNSSGFTGCNNKVIGAKYYDLDHQPGMLGKDDILSPVDTDGHGTHTASTAAGIVVKNASLFGVGKGTARGGVPLARIAMYKVCWYTGCSDMNLLAGFDDAIADGVDVLSVSIGGTVGPFFEDPIAIGAFHAMRRGVLVSSSAGNDGPLEATVQNVAPWILTVGATGLDREFRSQVKLGNGMKASGVSVNTFSPRKKMYPLTSGTLASNSSGAYWGNVSACDWASLIPEEVKGKIVYCMGNRGQDFNIRDLGGIGTIMSLDEPTDIGFTFVIPSTFVTSEEGRKIDKYINSTKYAQAVIYKSKAFKIAAPFVSSFSSRGPQDLSPNILKPDIVAPGLDILAGYSKLAPISGDPEDRRFANFNILTGTSMSCPHVAAAAAYVKSFHPKWSPAAIKSALMTTATTLKIKDNALGSGSGQLNPRIAVHPGLVYDIPTSGYIRFLCKEGYNSTTIGLLTGGKQKYKCSNFRPALGSDGLNYPSMHLQIKDPTARFSAVFYRTVTSVGHGASVYKATVKATKGLSVRVVPNTLSFQKAHQRRSFKIVLKGKPNNSRIQSAFLEWSDSKHKVKSPILVYRQSI* 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17586604 17590525 - Vvi8g1017 Vvi8g1017 791240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1017 707 Pfam Subtilase family 99 543 IPR000209 GO:0006508|GO:0008236
Vvi8g1017 707 SUPERFAMILY Subtilisin-like 96 555 IPR036852 GO:0004252|GO:0006508
Vvi8g1017 707 Pfam Fibronectin type-III domain 605 702 IPR041469 -
Vvi8g1017 707 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 74 IPR037045 -
Vvi8g1017 707 PRINTS Subtilisin serine protease family (S8) signature 96 115 IPR015500 -
Vvi8g1017 707 PRINTS Subtilisin serine protease family (S8) signature 169 182 IPR015500 -
Vvi8g1017 707 PRINTS Subtilisin serine protease family (S8) signature 495 511 IPR015500 -
Vvi8g1017 707 Gene3D Peptidase S8/S53 domain 98 567 IPR036852 GO:0004252|GO:0006508
Vvi8g1017 707 ProSiteProfiles Serine proteases, subtilase domain profile. 78 554 - -
Vvi8g1017 707 CDD Peptidases_S8_3 72 532 IPR034197 -
Vvi8g1017 707 Gene3D - 299 435 - -
Vvi8g1017 707 Gene3D - 571 705 - -
Vvi8g1017 707 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 704 IPR045051 -
Vvi8g1017 707 PANTHER CUCUMISIN PROTEIN 1 704 - -
Vvi8g1017 707 CDD PA_subtilisin_like 306 429 - -
Vvi8g1017 707 ProSitePatterns Serine proteases, subtilase family, serine active site. 496 506 IPR023828 -
Vvi8g1017 707 Pfam Peptidase inhibitor I9 13 74 IPR010259 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1017 - - vvi:100252726 1425.99