Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1018 ATGCACCTGAATCCATCAATGGAGGATGAAGTTCCTTCGTGGTTGCAGTCCCTTCATGTCTCCACTCACTTCCTTACCTTCTTCTTCTTTATAATCTTCTTGTGTTTGTCGTATATCATATATTTCCAATCTCTAAGACTGAAGCTATGGTGTAATTGTGAAATTTGCCACAGCTATGTCACCTTGAGTTGGTCCAAACAATTCCACAATCTCTGTGATTGGTACACTCATCTCCTCCGAAACTCCCCAACTCAAACTATCCACGTACATGTGCTGGGCAACACCATCACTGCAAACCAGGATAACGTGGAGTATATGCTCAAGACTAGATTTGAGAATTACCCAAAGGGGAAACCCTTCTCCGCAATCCTTGGGGACTTCCTGGGTAGGGGTATTTTCAACGTGGACGGAGAATTATGGAGGTTTCAAAGAAAAATGGCAAGTCTAGAGCTTGGAAGGACCTCTATACGGTCCTATGCATTCGAGATTGTCAATTACGAGATCGAACGCAGGCTTCTCCCACTTTTATGGTCGGTTGCGGGCAACGAAGATGGAGTTTTGGATTTGCAAGATGTGTTCAGAAGGTTCTCTTTTGATAGCATATGCAGATTCTCCTTTGGGTTGGACCCTGGGTGCCTAGAGTTAGCCATGGCTGCGTCCCCGCTGGTTTGGAGGATCAAACGTGTGTTGAACCTAGGTACTGAGAAGAAACTGCGAAAAGCCATTAAACTGATCAATATTCTTGCCCAAGAGGTCATAAAGCAGAAGCGTAAAATGGGCTTTTCTGCCCATAAGGATCTTCTTTCATTGTTCATGAGAAACCTAAACGATGACACATACCTGAGAGACATCGTCATAAGCTTCCTATTAGCTGGCCGCGACACAGTTGCTTCAGCTTTAACCAGCTTCTTCTGGCTGTTGTCCAACCACCCGAAGGTGGGGGCAGCAATTAGGTCGGAGGCGGACAAAATCATTGGTCCGGATCAAGAGGTTACAAGCTTCGAGCAAATGCAAGAACTCCACTATTTACAGGCAGCAGTGCATGAGAGCATGAGACTCTATCCACCGATACAATTCGATTCAAAATTCTGTCAGGAAGACGATGTGCTACCAGATGGAACATTTGTACAAAGAGGCACAAGAGTTACTTACCACCCCTATGCAATGGGTCGGATAGAAGGGATCTGGGGCCCTGACTGTTTAGAATTCAAGCCAGAACGGTGGCTCAAGGATGGTGTCTTTTTCCCAGAAAACCCATTTAAGTACCCAGTTTTCCAAGCGGGGATAAGGGTCTGTTTGGGAAAGGAAATGGCTCTGATGGAGTTCAAAAGTGTGGCTCTTTCATTGGTCCGACGCTTCCACATCGAATTGGCTACCCCGTGTCCCATTCCTCGGTTCTCTCCCGGACTCACCGCCACTTTTGGTAGCGGTCTCCCGGTTTTGGTACGAGGAAGAACAATCACATACGAGCAGCTCTTAAATTTTCGATGCTCAATGCTGTATTTCGCTAGAGCTATTTTTATTGAGGAAAGGCACTTTTCAGTTTTCACTTTCTGGTGTAGCAGTCTGGCAGAACCGTTATTTGATCATGACTGTCCATTTTAA 1605 45.73 MHLNPSMEDEVPSWLQSLHVSTHFLTFFFFIIFLCLSYIIYFQSLRLKLWCNCEICHSYVTLSWSKQFHNLCDWYTHLLRNSPTQTIHVHVLGNTITANQDNVEYMLKTRFENYPKGKPFSAILGDFLGRGIFNVDGELWRFQRKMASLELGRTSIRSYAFEIVNYEIERRLLPLLWSVAGNEDGVLDLQDVFRRFSFDSICRFSFGLDPGCLELAMAASPLVWRIKRVLNLGTEKKLRKAIKLINILAQEVIKQKRKMGFSAHKDLLSLFMRNLNDDTYLRDIVISFLLAGRDTVASALTSFFWLLSNHPKVGAAIRSEADKIIGPDQEVTSFEQMQELHYLQAAVHESMRLYPPIQFDSKFCQEDDVLPDGTFVQRGTRVTYHPYAMGRIEGIWGPDCLEFKPERWLKDGVFFPENPFKYPVFQAGIRVCLGKEMALMEFKSVALSLVRRFHIELATPCPIPRFSPGLTATFGSGLPVLVRGRTITYEQLLNFRCSMLYFARAIFIEERHFSVFTFWCSSLAEPLFDHDCPF* 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17604365 17606608 - Vvi8g1018 Vvi8g1018 791241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1018 534 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 Gene3D Cytochrome P450 57 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 SUPERFAMILY Cytochrome P450 66 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 Pfam Cytochrome P450 94 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1018 534 PANTHER CYTOCHROME P450 30 479 - -
Vvi8g1018 534 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 30 479 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g1018 Vvi13g663 ECH
Vvi6g1191 Vvi8g1018 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1018 K20624 - vvi:104880144 973.0