Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi8g1060 | ATGTGGCCTAAGGGCTTCACAGCTCAATCAGTTAAAATAAGCAAGAAAATTAGAATGGAGTATGAGATGGTGGGGATAGTAATAGCACTGGTGCTATGGGCAGTGTGGGCAATGGTGACGGAGCGGCGACACCGCCGTTTGGAAGAGCTGGGGCAGCTGCCACCAGGGCCAAGATCGTGGCCGGTGGTTGGCAACATCTTCCAATTGGGTTGGGCACCCCACGTATCTTTTGCTAAATTGGCTGGCAAGCACGGGCCCATCATGACTCTGTGGTTAGGTTCCATGAGCACCGTGGTGATTTCGTCGAATGAAGTGGCCAGGGAAATGTTTAAGAATCATGATGTGGTGCTTGCGGGGAGGAAGATTTATGAGGCCATGAAAGGGGACCGTGGAAACGAGGGTTCCATAATTACAGCTCAATATGGTCCCCAGTGGCGCATGCTGAGGCGCTTGTGCACCAGCGAGTTCTTTGTGACCAGCCGTCTGGATGCCATGCGTGGGGTACGTGGTGGGTGCATTGACCGTATGGTGCAGTTTGTGACCGAAGCAGGAACCTCAGGTACGCATGCCATCGATGTAGGGAGGTTCATTTTCTTGATGGCTTTCAATCTCATAGGCAATCTCATGTTCTCCAAGGATCTTTTGGATCCAAAATCGGAGAGAGGGGCGGAGTTTTTTTATCATGCAGGTAAAGTCATGGAGTTGGCAGGGAGGCCGAACGTGGCCGATTTTTTGCCAATTCTACGATGGTTTGATCCTCAAGGCATTAGGAGGAAGACCCAGTTCCATGTGGAACGAGCCTTTGCTATCGCTGGAGGCTTCATCAAAGAGAGGATGGAGACCATGGCCAAAGGAAGTGGTGAAGCGAAGAGCAAGGACTTCCTAGACGTGCTCTTGGAGTTCCGTGGAGATGGTGTGGAGGAGCCCTCTAGGTTCTCTTCCAGAACCATCAACGTTATCGTCTTTGAGATGTTCACGGCCGGGACTGACACCACCACGAGCACCTTGGAGTGGGCCATGGCAGAGCTCCTCCACACCCCACGTATACTAAACAAAGTCCAGGCTGAGCTGAGAAGCGTCGTCAAACCCGGTTCCAAGCTGGAGGAGAAGGACATGGAAAACCTCCCATACCTCATAGCAGTCATCAAGGAGACCCTGAGACTTCACCCACCTCTACCTTTCTTAGTCCCCCACATGGCAATGAACTCTTGCAAGATGCTAGGCTACTGCATTCCCAAAGAAACACAAGTGTTGGTTAACGTTTGGGCAATCGGACGCGACCCCAAGACCTGGAAAGACCCTTTAGTGTTCATGCCGGAGAGGTTCTTAGAGCCCAACATGGTGGACTACAAGGGACACCATTTTGAATTCATACCATTTGGGTCAGGCCGTCGAATGTGTCCTGCAGTTCCACTCGCTTCTCGTGTGCTCCCCTTGGCTCTAGGATCCCTCTTGCACTCCTTCAATTGGGTCTTACCGGATGGGCTCAATCCCAAAGAGATGGACATGACTGAAAGGATGGGAATAACACTGAGGAAATCTGTTCCATTGAGGGCCATGCCAGTACCATACAAGGGGATCCAAACTCAGATGGAGTGGACTACAAATTTTCTTGTTTGGTTGATTATCCCTTTCTTATCAGCACTGCTCTTGCTACTTCACCGGCTAAAGTCCGGCTTTAATAAGCATCTGCCACCGGGACCGCCGGGATGGCCAATTTTCGGAAATATTTTCGATCTGGGAACATTACCACACCAAAAACTTGCTGGCCTAAGAGACACGTATGGGGACGTCGTGTGGCTAAATTTAGGTTATATTGGGACGATGGTGGTTCAGTCCTCTAAGGCGGCCGCTGAACTGTTCAAGAACCATGACCTTTCTTTCTCGGACCGGAGCATCCACGAAACCATGCGAGTTCACCAATATAACGAATCCTCTTTGTCCCTGGCTCCATACGGTCCATACTGGCGCTCACTGAGACGTCTGGTGACCGTGGACATGCTGACCATGAAGCGAATCAACGAGACTGTCCCGATTCGTAGAAAATGCGTGGATGATTTGTTATTGTGGATAGAAGAGGAGGCACGGGGGATGGATGGAACGGCGACTGGTTTAGAGTTAGGTCGCTTCTTCTTCCTTGCCACATTCAACATGATCGGAAACCTTATGCTGTCACGAGACCTATTGGATCCGCAATCGAGGAAGGGGTCGGAGTTCTTTACAGCAATGCGCATATCGATGGAGAGCTCGGGCCATACCAACTTTGCTGATTTCTTTCCATGGCTTAAATGGTTGGACCCGCAGGGCTTAAAGAAAAGAATGGAGGTTGATCTTGGAAAATCCATAGAAATTGCTTCCGGCTTCGTTAAGGAGCGTATGAGACAAGGGCGAGCGGAGGAAAGCAAGAGGAAGGACTTCCTGGATGTGCTGTTAGAGTTTCAAGGTGATGGAAAGGATGAAGCAACTAAAATTTCCGAGAAGGGCATCAACATATTCATAACGGAAATGTTCATGGCTGCATCAGAAACCACTAGCAGCACCATGGAATGGGCTATGACTGAGCTCCTGCGCAGTCCTGAGTCCATGACTAAGGTTAAGGCAGAGCTTGGTCGAGTTATTGGAGAAAAAAGGAAGCTTGAAGAGAGCGACCTGGATGATCTCCCATATTTACATGCTGTGGTGAAAGAGACACTACGATTGCATCCTGCAGCTCCATTCCTAGTTCCACGAAGAGCAGTTGAAGATACTAAATTCATGGGGTACCACATACCCAAAGGCACGCAAGTATTCGTGAATGTTTGGGCAATTGGAAGGGAAGCCGAAACTTGGGATGATGCACTATGTTTTAAGCCAGAGAGGTTTGTAGACTCAAACATGGATTATAAGGGCCAAAATTTCGAGTTCATCCCATTTGGCGCAGGGCGAAGGATTTGCGTAGGAATTCCATTAGCCTATCGAGTGCTACACTTTGTGTTGGGGTCGCTGCTTCATCATTTTGACTGGCAACTTGAGCGTAATGTCACGCCAGAGACAATGGACATGAAAGAGAGGCGCGGAATCGTAATCTGCAAGTTTCATCCATTGAAAGCTAATCTTTCTCAATTTTTATATTCTTTTTTGAATGTTTGTGTCAACTTTTTGATAATGTACATAAAAATAGTTTCCAATAAAAAATATTCTCTAAATCCCTATAATTAA | 3198 | 48.53 | MWPKGFTAQSVKISKKIRMEYEMVGIVIALVLWAVWAMVTERRHRRLEELGQLPPGPRSWPVVGNIFQLGWAPHVSFAKLAGKHGPIMTLWLGSMSTVVISSNEVAREMFKNHDVVLAGRKIYEAMKGDRGNEGSIITAQYGPQWRMLRRLCTSEFFVTSRLDAMRGVRGGCIDRMVQFVTEAGTSGTHAIDVGRFIFLMAFNLIGNLMFSKDLLDPKSERGAEFFYHAGKVMELAGRPNVADFLPILRWFDPQGIRRKTQFHVERAFAIAGGFIKERMETMAKGSGEAKSKDFLDVLLEFRGDGVEEPSRFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHTPRILNKVQAELRSVVKPGSKLEEKDMENLPYLIAVIKETLRLHPPLPFLVPHMAMNSCKMLGYCIPKETQVLVNVWAIGRDPKTWKDPLVFMPERFLEPNMVDYKGHHFEFIPFGSGRRMCPAVPLASRVLPLALGSLLHSFNWVLPDGLNPKEMDMTERMGITLRKSVPLRAMPVPYKGIQTQMEWTTNFLVWLIIPFLSALLLLLHRLKSGFNKHLPPGPPGWPIFGNIFDLGTLPHQKLAGLRDTYGDVVWLNLGYIGTMVVQSSKAAAELFKNHDLSFSDRSIHETMRVHQYNESSLSLAPYGPYWRSLRRLVTVDMLTMKRINETVPIRRKCVDDLLLWIEEEARGMDGTATGLELGRFFFLATFNMIGNLMLSRDLLDPQSRKGSEFFTAMRISMESSGHTNFADFFPWLKWLDPQGLKKRMEVDLGKSIEIASGFVKERMRQGRAEESKRKDFLDVLLEFQGDGKDEATKISEKGINIFITEMFMAASETTSSTMEWAMTELLRSPESMTKVKAELGRVIGEKRKLEESDLDDLPYLHAVVKETLRLHPAAPFLVPRRAVEDTKFMGYHIPKGTQVFVNVWAIGREAETWDDALCFKPERFVDSNMDYKGQNFEFIPFGAGRRICVGIPLAYRVLHFVLGSLLHHFDWQLERNVTPETMDMKERRGIVICKFHPLKANLSQFLYSFLNVCVNFLIMYIKIVSNKKYSLNPYN* | 1066 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 18101749 | 18121870 | - | Vvi8g1060 | Vvi8g1060 | 791283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi8g1060 | 1065 | PANTHER | CYTOCHROME P450 FAMILY 1 | 19 | 527 | - | - | |
| Vvi8g1060 | 1065 | PANTHER | CYTOCHROME P450 FAMILY 1 | 543 | 1031 | - | - | |
| Vvi8g1060 | 1065 | Pfam | Cytochrome P450 | 565 | 1020 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | Pfam | Cytochrome P450 | 54 | 511 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | E-class P450 group I signature | 81 | 100 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | E-class P450 group I signature | 379 | 397 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | E-class P450 group I signature | 420 | 444 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | P450 superfamily signature | 892 | 903 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | P450 superfamily signature | 969 | 978 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | PRINTS | P450 superfamily signature | 978 | 989 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 971 | 980 | IPR017972 | GO:0005506|GO:0016705 | |
| Vvi8g1060 | 1065 | Gene3D | Cytochrome P450 | 554 | 1031 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | Gene3D | Cytochrome P450 | 38 | 519 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | SUPERFAMILY | Cytochrome P450 | 565 | 1031 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | SUPERFAMILY | Cytochrome P450 | 54 | 523 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi8g1060 | 1065 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506|GO:0016705 | |
| Vvi8g1060 | 1065 | PANTHER | CYTOCHROME P450 76A1-LIKE | 19 | 527 | - | - | |
| Vvi8g1060 | 1065 | PANTHER | CYTOCHROME P450 76A1-LIKE | 543 | 1031 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi8g1060 | - | - | egt:105956739 | 1239.94 |