Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1061 ATGATTGGAGAGAAGGGGAAGCTACTGTATAATGTGTACAGAGCCCTAACCTACGGTCTCTCTCCATTTCTCTACCTTCATCTACGTTTCCGCACTCTCCAGGGCATCGAACACCCTGTCCGGTGGCCGGAGCGTCTTGGCCGTCCTTCTACCCCACGCCCTCCCGGCCATCTCATATGGTTCCACACCGCCTCTTTAGGTGAAGGAATGGCTGCAATCCCAGTAATCAAACGCTGTATTGAGGAAAGACCCGATTGTACCATTTTGATGACTTCAACTACTGCGTCTGCATTTGAAATAATAACGAATCAGCTCCCTACTGGTGTCATATATCAGTTTGCCCCACTTGATATTCCTGCTGCTATGGATGCTTTCCTTGGCTATTGGAAGCCCAATGCTGTCATGCTAATGGAGTGTGAACTGTGGCCAAATCTTATTTTAGGAGCTGCAAGAAATGGTATTGCACTGGCATTATTAAATGCTCGGATGTCTGCAAAATCCTTTTCACGTTGGTCTCGACCTGTGCTTCTTCCGTTGATTTCCTTAATGCTGTCAAAGTTTTCCTTGATTGTCCCATTGAGCACCATGCAGGGAATCCGCTTTCAGCTATTGCAAGCCCCACCATATGTCATCAACTTTTCTGGTGACCTGAAATATACGGTTGAAGAATTTGACATTTCCAAAAGAGGGGTACAAAGTATAGAAGAACTTAAGGTGCAGCTTGCCCATAGGCGGGTTTGGATGGTTTCTTCCATACATAGGGGTGAAGAAGAAGTTATGCTAGGAGTTCACAAAGTTCTAATGCGAATGCACCCTGATATGGTCACCATTATTGTGCCTCGATATCCACAGCATGGACGTGAGATTGCTATAGAACTGCAGAAAGAAGGGCTGAGTGTAGCTCTGAGGTCACGTGATGAGAAACTTGTGTCAGGGACAAGTATATATGTGGTGGACACATTAGGTGAACTGAGACACTTTTATACACTAACTCCCATAGCAGTAATTGGAGGTTCTTTCTTGCCTGGTTTAACTGGCCATAACATTTCGGAAGCTGCTGCAGCTGGCTGTGCTGTTCTGACTGGTCATCATGTTGGGCATTTTTCGGATATGGTACTGAAAATGCAACGATCGAATCCTTTGTCAGTTCTGCAGGATGGAAGTTGGCCCAAGCTCAGCCTGAACTATTAA 1191 45.76 MIGEKGKLLYNVYRALTYGLSPFLYLHLRFRTLQGIEHPVRWPERLGRPSTPRPPGHLIWFHTASLGEGMAAIPVIKRCIEERPDCTILMTSTTASAFEIITNQLPTGVIYQFAPLDIPAAMDAFLGYWKPNAVMLMECELWPNLILGAARNGIALALLNARMSAKSFSRWSRPVLLPLISLMLSKFSLIVPLSTMQGIRFQLLQAPPYVINFSGDLKYTVEEFDISKRGVQSIEELKVQLAHRRVWMVSSIHRGEEEVMLGVHKVLMRMHPDMVTIIVPRYPQHGREIAIELQKEGLSVALRSRDEKLVSGTSIYVVDTLGELRHFYTLTPIAVIGGSFLPGLTGHNISEAAAAGCAVLTGHHVGHFSDMVLKMQRSNPLSVLQDGSWPKLSLNY* 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18123855 18135276 + Vvi8g1061 Vvi8g1061 791284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1061 396 Pfam 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 41 220 IPR007507 -
Vvi8g1061 396 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 9 385 IPR039901 GO:0016740
Vvi8g1061 396 Gene3D - 40 219 IPR038107 -
Vvi8g1061 396 Gene3D Glycogen Phosphorylase B; 230 389 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1061 K02527 - vvi:100247609 772.311