Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1071 ATGGCTTCGGGACAAGAAAAAGAAGAACGGGCCGAGCCAGCCTTGAGGTTGGCCGGCTCGGAGAAGAGGGAGGCCGAAAGGGAGAGAGAAGAAGGAGCAAAATTGGTTTCTGATCGACAGAAACAGGAGCAGCAGCAGCGCCCTGGTGTGATTGGGTCCGTTCTCAGGGCGGTTCAGGAGACCTATGAGCATGCTAAAGAAGCAGCCACCGGAAAGTCTCAGGAGGCCGTTGAGAAGACGAGGGAAACTGCTGAGGAGGCGAAAGAGAAGATGCGCGAATCCAAGGATTATACGGCTGACAAATCCAAGGAAGCCAAGGACTCCGCTGCCGAGAAAGCCAGGGAGACCAAGGATACGGGAGCCGAAAAAACAGTTGAGCACAAGAATTCTGCAGCAGAGAAGGCGAAGGAGACTAAGGATGCGGTGGCTGGACAGGCAGGGGAGTACAAGGACTACGCTGCGGAGAAAGCGAGAGGGGTCAAGGACACCACATTGGGGAAGACAGGGGAGTACAAAGATTATGCAGCAGAAAAAGCCAAGGAAACCAAGGACGCCACAGTGCAGAAAGCAGCCGAGTACAAGGACTATACTGCAGGGAAAGCTGAGGAAGGCAAGGATACTTCTGTTGGTAAGATTACTGAGCTCAAGGATTCTGCAGCTGACGCCGCTAGAAGGGCCATGGAATATTTGACTGGTAAGAAAGAGGAAACCAAGCACAAAACTTCCGAGACTGCAGAGGCTGCTAAGGAGAGGTTGACTGAAACTGAGGAAGCAGCGAGACGGAAAATGGAAGAGTTAAAACTTAAAGGGAAGGAGGAGCACAAGGAAGCCGAAGGGCGCGAAACCCAGCAATCTAAGGACGCTCCAGGTGTCAAGGGGGTGCTGATCAACGTGCGGGAGACTCCCACCGGATATGTAGCCACCGCTCTGAAAGCCGCAGATCAGATGACCGCTCAAACTTTCAACGACGTGGGCCCCCTGGACGAGGAGGAGATTGCACGTGTAGATCATCAAGAAAAGACCTAG 1026 53.31 MASGQEKEERAEPALRLAGSEKREAEREREEGAKLVSDRQKQEQQQRPGVIGSVLRAVQETYEHAKEAATGKSQEAVEKTRETAEEAKEKMRESKDYTADKSKEAKDSAAEKARETKDTGAEKTVEHKNSAAEKAKETKDAVAGQAGEYKDYAAEKARGVKDTTLGKTGEYKDYAAEKAKETKDATVQKAAEYKDYTAGKAEEGKDTSVGKITELKDSAADAARRAMEYLTGKKEETKHKTSETAEAAKERLTETEEAARRKMEELKLKGKEEHKEAEGRETQQSKDAPGVKGVLINVRETPTGYVATALKAADQMTAQTFNDVGPLDEEEIARVDHQEKT* 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18215449 18217141 - Vvi8g1071 Vvi8g1071 791294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1071 341 Coils Coil 74 97 - -
Vvi8g1071 341 Coils Coil 238 269 - -
Vvi8g1071 341 MobiDBLite consensus disorder prediction 229 292 - -
Vvi8g1071 341 Gene3D - 173 231 - -
Vvi8g1071 341 Gene3D - 130 172 - -
Vvi8g1071 341 Gene3D - 89 129 - -
Vvi8g1071 341 PANTHER DAUER UP-REGULATED-RELATED 1 332 - -
Vvi8g1071 341 MobiDBLite consensus disorder prediction 1 41 - -
Vvi8g1071 341 MobiDBLite consensus disorder prediction 1 143 - -
Vvi8g1071 341 MobiDBLite consensus disorder prediction 229 285 - -
Vvi8g1071 341 Pfam Late embryogenesis abundant protein 75 116 IPR004238 -
Vvi8g1071 341 Pfam Late embryogenesis abundant protein 107 149 IPR004238 -
Vvi8g1071 341 Pfam Late embryogenesis abundant protein 172 214 IPR004238 -
Vvi8g1071 341 Pfam Late embryogenesis abundant protein 150 193 IPR004238 -
Vvi8g1071 341 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 1 332 - -
Vvi8g1071 341 MobiDBLite consensus disorder prediction 60 143 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1071 - - vvi:100263055 531.561