Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1072 ATGGAAAAGCAATTAAAGGTATACGTCTATGATGAAGGTGAGCCCCCCTTGTTTCATAATGGTCCCTGCAAGAGCATATACTCCATGGAGGGGAATTTCATTCACAAGATGGAGATGGATAGCCACTTCCGAACCAAAGATCCTGAAAAGGCTCACCTTTTTTTCCTCCCCTTCAGTGTGGCAATGCTGGTTAGGTTTGTCTATGTCCGTGACTCCCATGATTTGGGTCCCATAAAACAAACGGTCATTGATTATGTGAATGTTGTTTCGACCAAGTATCCTTATTGGAATCGAAGCCTCGGTGCAGATCATTTCATGCTTGCTTGCCATGATTGGGGGCCTGAAACTTCCTTCTCCATTCCTTACCTGCATAAGAACTCTATTAGAGTTCTATGCAATGCAAATACCTCGGAAGGATTCAACCCTTCCAAAGACGTATCCTTCCCTGAAATCAATCTCCTAACCGGTTCAACAGACAGCTTCATCGGTGGGCCATCTCCATCACACCGTACCCTATTGGCCTTCTTTGCCGGCGGGCTTCACGGCCCCATCAGACCTATACTTCTGGAGCACTGGGAAAACAAGGATGAAGATGTAAAGGTCCACAAGTATCTTCCAAAGGGTGTGTCTTACTATGAAATGATGAGAAAGAGCAAGTACTGCCTTTGCCCGAGCGGATATGAAGTTGCGAGCCCAAGAGTTGTGGAGGCACTTTACACAGGGTGTGTTCCAGTGCTGATTTCAGACCATTATGTTCCACCATTCAGCGATGTCCTGAATTGGAAGTCTTTCTCTGTGGAGGTTCCGGTCAGGGAAATTCCAAACTTGAAGAGAATACTAATGGACATATCTCCAAGGCAGTATATAAGAATGCAGAGGAGAGGGATTCAAGCAAGGAGGCACTTTGAGGTTAATTCCCCTCCCAAGAGATACGACGTCTTCCACATGATTCTCCATTCTCTCTGGCTTAGAAGACTCAACTTTCGGGTTCACCATCATGGAATTGGCAAATAA 1014 45.66 MEKQLKVYVYDEGEPPLFHNGPCKSIYSMEGNFIHKMEMDSHFRTKDPEKAHLFFLPFSVAMLVRFVYVRDSHDLGPIKQTVIDYVNVVSTKYPYWNRSLGADHFMLACHDWGPETSFSIPYLHKNSIRVLCNANTSEGFNPSKDVSFPEINLLTGSTDSFIGGPSPSHRTLLAFFAGGLHGPIRPILLEHWENKDEDVKVHKYLPKGVSYYEMMRKSKYCLCPSGYEVASPRVVEALYTGCVPVLISDHYVPPFSDVLNWKSFSVEVPVREIPNLKRILMDISPRQYIRMQRRGIQARRHFEVNSPPKRYDVFHMILHSLWLRRLNFRVHHHGIGK* 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18222783 18224352 - Vvi8g1072 Vvi8g1072 791295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1072 337 Pfam Exostosin family 2 281 IPR040911 -
Vvi8g1072 337 Gene3D Glycogen Phosphorylase B; 168 306 - -
Vvi8g1072 337 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 1 331 IPR004263 GO:0006486|GO:0016757
Vvi8g1072 337 PANTHER EXOSTOSIN FAMILY PROTEIN 1 331 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1072 - - vvi:100257921 712.605