Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1077 ATGGGGTTTGCAAGAAATGCCTTGGGAGCCTTTCTTCTTCTTGTTTTGATTTTGTCAGTAGCTCATGGGGATCCTCTTGTTCCTGCACTCTGCATCTTTGGGGACTCTGTAGTTGATGCAGGCAACAACAACAACCTTGCCACCCTTGTCAAGGCAAACTTCCCTCCTTATGGAAGAGACTTTGTTACTCACAGGCCAACAGGAAGGTTCTGCAATGGAAAGCTAGCCACAGACTTCACTGCCGAGTACCTCGGGTTCACTTCATACCCGCCACCTTACCTTAGCCAGGAGGCACAGGGGAAGAACCTCTTGCAGGGAGCCAACTTCGCCTCAGCTTCTTCTGGTTATTATGACAGGACAGCACAGTTATATCGTGCGATTTCATTGACCCAGCAGGTAGAATACTACAAGGAATACCAAGCAAAAGTTGTAAGGCTGGTAGGAAAAGCTAGAGCTCATGATATATTCTCTGGCGGAATCCACCTTCTGAGTGCTGGGAGTAGTGATTTCGTTCAGAACTACTATATCAACCCCCTCCTTAACAGGGCCTACTCGGCCGATCAATTCTCAGATCTTCTCATGAAATCCTACACTACTTTTGTTCAGAATCTATACGGTTTAGGGGTAAGGAAGATTGGAGTGACAACGTTACCGCCAACTGGGTGTTTGCCTGCAGCTATCACCCTCTTCAGCTCGGGGTCCAACCAGTGTGTTGCAAGGTTAAATCAAGATGCCATTAACTTCAACAGTAAGCTAAACATCACATCTCAAGTTTTGCAAAATAAGCTTCCCGGTCTCAAACTTGTGGTCTTTGACATCTATCAGCCACTCCTGAATCTGATCACAAAGCCCACTGATAATGGGTTCTTTGAGTCAAGGAAGGCTTGCTGTGGTACAGGTACAATAGAAACCTCCCTGCTTTGCAATGCTAGGTCTGTTGGAACCTGCTCCAATGCTTCACAGTATGTGTTTTGGGACGGATTCCATCCCTCTGAATCAGCAAACCAGTTGTTGGCTGGTAGCCTACTTGAGCAGGGAATCAACCTCATTGGGCATCATGTGCTGTGGGTGAATGCGTGTTTTAACTTGTAA 1092 46.7 MGFARNALGAFLLLVLILSVAHGDPLVPALCIFGDSVVDAGNNNNLATLVKANFPPYGRDFVTHRPTGRFCNGKLATDFTAEYLGFTSYPPPYLSQEAQGKNLLQGANFASASSGYYDRTAQLYRAISLTQQVEYYKEYQAKVVRLVGKARAHDIFSGGIHLLSAGSSDFVQNYYINPLLNRAYSADQFSDLLMKSYTTFVQNLYGLGVRKIGVTTLPPTGCLPAAITLFSSGSNQCVARLNQDAINFNSKLNITSQVLQNKLPGLKLVVFDIYQPLLNLITKPTDNGFFESRKACCGTGTIETSLLCNARSVGTCSNASQYVFWDGFHPSESANQLLAGSLLEQGINLIGHHVLWVNACFNL* 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18265207 18269207 - Vvi8g1077 Vvi8g1077 791300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1077 363 Gene3D SGNH hydrolase 21 347 IPR036514 -
Vvi8g1077 363 PANTHER GDSL-MOTIF LIPASE 8 349 - -
Vvi8g1077 363 PANTHER GDSL ESTERASE/LIPASE EXL3 8 349 - -
Vvi8g1077 363 Pfam GDSL-like Lipase/Acylhydrolase 32 339 IPR001087 GO:0016788
Vvi8g1077 363 CDD SGNH_plant_lipase_like 28 343 IPR035669 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g1139 Vvi8g1077 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1077 - - vvi:100242529 694.501