Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi8g1081 | ATGGAACTCTCACTTCTCTCTGGTCACCAACTCAACCCCACTCTTCTCCACAAGAATTTCAGCCCCCTTCCCATTACAAGGAAGAGGTCCTTCAAGAGGAATTCATCTGTGTTGTTTTGTCAATGCTCGTTCTCGTCCTCAGATGATTCTGCAAAACCAGCAACCCTATCTTTACAGCGTGAGGGAAGGAGGGCATTGATGGGTTGTGTTCTTGTAGCAGCTGCTGGAATTTATGTCTGTGATGTGGCTGGCGCTGTTAGCACGAGTAGAAGAGCTCTTAGAGGAGCAAAAATACCTGAGAGTGACTACACAACTCTTCCCAATGGTCTGAAGTACTATGATTTGAAGGTTGGGGGTGGACTTAAGGCTGTGAAGGGATCTCGGGTTGCAGTCCACTATGTTGCTAAGTGGAAGGGCATCACCTTTATGACAAGTAGACAAGGACTTGGTGTTGGAGGTGGAACGCCTTATGGATTTGATGTAGGTCAATCTGAGAGGGGATCCGTTCTCAAAGGATTAGACCTAGGTGTTGAAGGCATGAAAGTAGGAGGCCAGCGATTACTAATTGTTCCTCCTGAGCTAGCATATGGAAGTAAAGGAGTCCAGGAAATCCCTCCAAATGCAACAATTGAGTTGGATGTTGAGCTTCTGGCCATCAAACAAAGCCCACTTGGGACTGGTGTAAAAATTATTGAAGGATAA | 702 | 46.15 | MELSLLSGHQLNPTLLHKNFSPLPITRKRSFKRNSSVLFCQCSFSSSDDSAKPATLSLQREGRRALMGCVLVAAAGIYVCDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGGGLKAVKGSRVAVHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGQSERGSVLKGLDLGVEGMKVGGQRLLIVPPELAYGSKGVQEIPPNATIELDVELLAIKQSPLGTGVKIIEG* | 234 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 18294778 | 18298975 | + | Vvi8g1081 | Vvi8g1081 | 791304 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi8g1081 | 233 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 122 | 217 | IPR001179 | GO:0003755 | |
| Vvi8g1081 | 233 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 19 | 233 | - | - | |
| Vvi8g1081 | 233 | Gene3D | - | 86 | 224 | IPR046357 | GO:0003755 | |
| Vvi8g1081 | 233 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 126 | 220 | IPR001179 | GO:0003755 | |
| Vvi8g1081 | 233 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC | 19 | 233 | - | - | |
| Vvi8g1081 | 233 | SUPERFAMILY | FKBP-like | 98 | 220 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi8g1081 | - | - | vvi:100260611 | 444.506 |