Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1086 ATGCCGTCGTCTATTTCAATTTTGGCCCTGATCTTGGCCTTCGCCGCCATTCTACTGACGGCGGCCGTAGTCCACTGTGGTTCTCCGGCCAGCCTTCTCACTCTGGAGAGGGCTTTTCCGGTGAACCAGCGGGTCGAGCTCGAGGTACTCAGGGCTCGTGATCAAGCCAGGCACGGACGATTATTGCGAGGTGTAGTTGGGGGTGTTGTTGATTTCACCGTCTATGGTACCTCCGATCCGTACCTGGTTGGGCTTTATTTTACAAAAGTGAAACTGGGCTCTCCTCCAAGGGAATTCAATGTGCAGATTGATACTGGAAGTGATATATTGTGGGTTACCTGCAATTCGTGCAATGATTGCCCCAGAACCAGCGGACTCGGAATTGAGCTCAGTTTTTTTGATCCTTCCAGCTCATCAACCACTTCTCTAGTCTCCTGTTCACACCCAATATGTACTTCCCTAGTTCAAACCACTGCAGCTGAGTGCTCCCCTCAGAGTAATCAGTGCAGTTACTCATTCCACTATGGGGATGGAAGTGGGACAACAGGTTATTATGTATCCGACATGTTGTATTTTGACACAGTTTTGGGGGACTCTTTGATTGCTAACTCCTCAGCTTCCATTGTATTTGGGTGTAGCACCTACCAATCCGGAGACTTGACTAAAGTGGATAAGGCAATTGATGGAATTTTTGGGTTTGGCCAACAGGATCTATCTGTTGTGTCACAATTGTCATCACTAGGGATAACACCAAAGGTGTTCTCCCATTGCTTGAAAGGAGAAGGAGATGGTGGGGGTAAGCTGGTCCTTGGTGAGATTTTGGAGCCAAATATAATTTATAGTCCACTTGTGCCATCACAGTCTCATTATAATCTAAACCTGCAGAGCATTTCTGTCAATGGGCAACTGCTGCCAATTGATCCGGCTGTGTTTGCAACATCCAACAACCAAGGAACAATTGTTGATTCTGGAACAACTTTGACATACCTAGTGGAAACCGCTTATGATCCTTTTGTAAGCGCTATAACTGCAACTGTTTCATCATCTACGACTCCTGTCCTTTCAAAAGGAAACCAGTGTTATCTAGTCTCCACCAGTGTAGATGAAATATTTCCTCCAGTCAGTTTAAACTTTGCTGGCGGTGCATCCATGGTTTTAAAACCAGGAGAATACCTTATGCATCTTGGTTTTTCTGATGGTGCTGCAATGTGGTGCATTGGATTTCAGAAAGTTGCAGAACCAGGGATAACAATTTTAGGAGATCTTGTTCTAAAGGATAAAATCTTTGTTTATGACCTTGCTCATCAACGGATTGGATGGGCTAACTATGACTGTTCATTGTCTGTAAATGTCTCTGTAACATCTGGTAAGGATGAATTCATAAATTCAGGACAGCTGAGTATGAGCAGCTCGTCACAGAACATGCTCTTTGAGCCGATACCTAGAAGCATTAAGGCTCTCCTTATCCACATTTTAGTGTTCAGTGGGTTCCTATTCTTTGTAACTTAA 1509 44.6 MPSSISILALILAFAAILLTAAVVHCGSPASLLTLERAFPVNQRVELEVLRARDQARHGRLLRGVVGGVVDFTVYGTSDPYLVGLYFTKVKLGSPPREFNVQIDTGSDILWVTCNSCNDCPRTSGLGIELSFFDPSSSSTTSLVSCSHPICTSLVQTTAAECSPQSNQCSYSFHYGDGSGTTGYYVSDMLYFDTVLGDSLIANSSASIVFGCSTYQSGDLTKVDKAIDGIFGFGQQDLSVVSQLSSLGITPKVFSHCLKGEGDGGGKLVLGEILEPNIIYSPLVPSQSHYNLNLQSISVNGQLLPIDPAVFATSNNQGTIVDSGTTLTYLVETAYDPFVSAITATVSSSTTPVLSKGNQCYLVSTSVDEIFPPVSLNFAGGASMVLKPGEYLMHLGFSDGAAMWCIGFQKVAEPGITILGDLVLKDKIFVYDLAHQRIGWANYDCSLSVNVSVTSGKDEFINSGQLSMSSSSQNMLFEPIPRSIKALLIHILVFSGFLFFVT* 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18335898 18342508 - Vvi8g1086 Vvi8g1086 791309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1086 502 Pfam Xylanase inhibitor C-terminal 289 441 IPR032799 -
Vvi8g1086 502 PANTHER ASPARTYL PROTEASES 8 464 IPR001461 GO:0004190|GO:0006508
Vvi8g1086 502 SUPERFAMILY Acid proteases 81 448 IPR021109 -
Vvi8g1086 502 Gene3D Acid Proteases 273 452 IPR021109 -
Vvi8g1086 502 ProSiteProfiles Peptidase family A1 domain profile. 86 441 IPR033121 -
Vvi8g1086 502 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 8 464 - -
Vvi8g1086 502 Pfam Xylanase inhibitor N-terminal 86 271 IPR032861 -
Vvi8g1086 502 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Vvi8g1086 502 PRINTS Pepsin (A1) aspartic protease family signature 319 330 IPR001461 GO:0004190|GO:0006508
Vvi8g1086 502 PRINTS Pepsin (A1) aspartic protease family signature 417 432 IPR001461 GO:0004190|GO:0006508
Vvi8g1086 502 CDD pepsin_A_like_plant 86 445 IPR034161 -
Vvi8g1086 502 Gene3D Acid Proteases 71 272 IPR021109 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g1131 Vvi8g1086 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1086 - - vvi:100252154 919.457