Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1088 ATGCAGCCAGCACCTGGCGTCCCTCTTCTGCCTTTCATGCGGAGGTACGCAGCTATGCTGTCTCTCTTTTGTCACTCGGGGGCGTCAGGCATGGTTACTTTCCGGGCGAACGTGCTCTATGGCCATGTCCGGGGTATGGCGGCGGCTGCGGTGGTCATGATGATTGCAACATCACTACTACTGATTGGGATTGGGAGCGTCAATGTAGGTGAGGCTTGGGAGGAAGCCAATGTGATCCATGTGGGTGGGAAAGTGTTGTGCCAAGACTGCACCAAGGGCTGGAATGAATGGGTTAATGGCTCCAACCCCATTAAAGGTTCTAGGGTATCTGTTACGTGCATGGATGATAGGAGGAGGGTGATGTACTATGGAAGTGATGAGACTGACGAGGCGGGAAAATACTAG 405 53.33 MQPAPGVPLLPFMRRYAAMLSLFCHSGASGMVTFRANVLYGHVRGMAAAAVVMMIATSLLLIGIGSVNVGEAWEEANVIHVGGKVLCQDCTKGWNEWVNGSNPIKGSRVSVTCMDDRRRVMYYGSDETDEAGKY* 135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18359685 18365996 + Vvi8g1088 Vvi8g1088 791311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1088 134 PANTHER OS01G0164075 PROTEIN 46 134 - -
Vvi8g1088 134 PANTHER POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN 46 134 - -
Vvi8g1088 134 Pfam Pollen protein Ole e 1 like 81 134 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1088 - - vvi:100264165 182.956