Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1093 ATGTTCAAGTCTTTCTGGGGATCACAAGAGCAACAACCTCAGCCACGGCCACAGGATATTTCTGGACAGTCTTGGTATCCTCCGTCAGTAGTTACCTCTCCAAGTTCCTCACGCCCTTCAACACCAAGTAGTAGCACTTCTAGTAGCTTCAGTCTGCAAAGGCCTTCTGATCGACCCCAGTCTCCATCACATGTTTCTCCTGCTGAAGCTGCTGGCATGATTGTTCTGTTAAAGGATAAGAGCATCGATGAGTTACGAAAGCTTTTATCTGACAAGGATGCATACAACCAATTGTTACTTTCACTTGATCAAGTTAAAATTCAAAACAATCTAAGAGATGAACTTCGGAAGGAAACTCTGCAACTTGCGAGAGAGAACTTGGAGAAGGAACCACAGATAGTGGAACTGAGAAATCAGTGCAGAATAATCCGGACAACAGAGTTAGCTGCTGCACAGGAGAAATTAAATGAACTGGAGAGACAGAAAGAAGAGATCTTAAAGTTCTACTCCCCTGCATGCTTGCTCCACAGGCTTCAAGAAACTATGAACAAAACAGAGGAGGAATCTGAAACTCTGCATAGGCAGCTTCTTGATAGAGAGATGGATCTTGGGGCTTTTGTTCAGAAATACAAGAGGCTCCGAACTACTTACCACAGGCGAGCGCTCACGCATCTGGCAGCCAAGACATCTTCAACCGGATGA 702 44.87 MFKSFWGSQEQQPQPRPQDISGQSWYPPSVVTSPSSSRPSTPSSSTSSSFSLQRPSDRPQSPSHVSPAEAAGMIVLLKDKSIDELRKLLSDKDAYNQLLLSLDQVKIQNNLRDELRKETLQLARENLEKEPQIVELRNQCRIIRTTELAAAQEKLNELERQKEEILKFYSPACLLHRLQETMNKTEEESETLHRQLLDREMDLGAFVQKYKRLRTTYHRRALTHLAAKTSSTG* 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18396650 18401473 - Vvi8g1093 Vvi8g1093 791316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1093 233 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 4 231 - -
Vvi8g1093 233 MobiDBLite consensus disorder prediction 1 67 - -
Vvi8g1093 233 Coils Coil 141 168 - -
Vvi8g1093 233 Pfam Modifier of rudimentary (Mod(r)) protein 78 222 IPR009851 -
Vvi8g1093 233 MobiDBLite consensus disorder prediction 1 63 - -
Vvi8g1093 233 ProSiteProfiles VPS37 C-terminal domain profile. 152 233 IPR009851 -
Vvi8g1093 233 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 4 231 - -
Vvi8g1093 233 SUPERFAMILY Endosomal sorting complex assembly domain 165 220 IPR037202 -
Vvi8g1093 233 Coils Coil 108 130 - -
Vvi8g1093 233 Coils Coil 175 195 - -
Vvi8g1093 233 Gene3D Helix hairpin bin 156 227 IPR029012 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1093 K12185 - vvi:100264180 417.542