Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi8g1098 | ATGATCTTACAGAAACACACAAATATTAAGGAGGGGATAAACTTTGACTTGCCGGAGGTCGTAGCCAAGGCCCCAAACATTCCCGGTGTGACCCACGTTGGAGGTGACATGTTCAAATCTGTTCCTGATGGCGATGCTATCTTTATGAAGTGGGTGTTGACAACTTGGACTGATGAAGAATGCAAGCTGATCATGAAGAACTGCTACAATGCACTACCGGTGGGTGGAAAGATGATAGCCTGCGAGCCAGTGCTGCCAAAGGAGTCAGACAATAGTCTTAGAACACGAGCCCTCTTGGAAGGAGACATCTTTGTCATGACAATCTACAGAGCCAAGGGTAAGCATAGGACTGAAGAAGAATTTAGGCAACTGGGTCTCTCTGCAGGTTTCCCCCATTTACGAGCATTCTATATCGACCATTTCTATACTGTCTTAGAGTTCCAAAAGTGA | 450 | 45.78 | MILQKHTNIKEGINFDLPEVVAKAPNIPGVTHVGGDMFKSVPDGDAIFMKWVLTTWTDEECKLIMKNCYNALPVGGKMIACEPVLPKESDNSLRTRALLEGDIFVMTIYRAKGKHRTEEEFRQLGLSAGFPHLRAFYIDHFYTVLEFQK* | 150 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 18446518 | 18449828 | - | Vvi8g1098 | Vvi8g1098 | 791321 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi8g1098 | 149 | Gene3D | Vaccinia Virus protein VP39 | 1 | 134 | IPR029063 | - | |
| Vvi8g1098 | 149 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 149 | IPR016461 | GO:0008168 | |
| Vvi8g1098 | 149 | PANTHER | O-METHYLTRANSFERASE | 1 | 148 | IPR016461 | GO:0008168 | |
| Vvi8g1098 | 149 | PANTHER | OS02G0823400 PROTEIN | 1 | 148 | - | - | |
| Vvi8g1098 | 149 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 2 | 147 | IPR029063 | - | |
| Vvi8g1098 | 149 | Pfam | O-methyltransferase domain | 11 | 130 | IPR001077 | GO:0008171 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi8g1098 | - | - | vvi:100259003 | 311.227 |