Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1099 ATGGCCACTGCTAAACTGGATGACGTGTCTGAGCTCCTGGGTGGTGCCCTCTTCCTTCCTTTGTTCAGATGGATGAATATGTACGGACCCATTTACCGGCTCGCCGCCGGGCCCCGCAATTTTGTGGTTGTCAGTGACCCCGCTATTGCTAAGCATGTTCTGAGGAATTATGGCAAATACGCCAAGGGTCTCGTGGCCGAGGTTTCGGAGTTTTTGTTCGGATCGGGTTTTGCCATTGCGGAAGGCGAGCTTTGGACGGTGAGGCGCAGGGCTGTGGTTCCTTCTCTTCACAAGCGATACTTATCCATAATTGTTGATCGGGTGTTTTGCAAATGTGCTGAGAGATTGGTAGAGAATCTTAGAACTGATGCACTCAATGGCAGTGCTGTAAACATGGAGGAGAAGTTTTCTCAATTGACTCTGGATGTCATCGGTCTATCTGTGTTCAACTACAATTTTGATTCACTTACTGCTGATAGTCCTGTTATTGATGCAGTTTACACTGCATTGAAAGAGGCTGAGGCTCGATCAACTGACCTTTTACCATACTGGAAGGTCAAAGCTTTGTGTAAGATAATCCCTAGACAAATAAAAGCTGAAGAATCAGTAACAGTGATAAGGAAAACTGTAGAAGAACTTATTGCTAAGTGCAAAGAAATTGTGGAAAGAGAGGGTGAGAGGATTGATGAGGATGAATATGTTAATGACTCAGATCCAAGCATCCTTCGTTTCTTGCTTGCTAGCAGAGAAGAGGTTTCAAGTGTGCAATTACGAGATGACCTTTTATCAATGTTGGTTGCTGGGCATGAGACCACTGGTTCAGTGTTGACTTGGACATTATATCTTTTAAGTAAGAACTCTTCTTCTCTGATGAAAGCACAAGAAGAGGTCGACAGGGTTTTACAGGGAAGGTCTCCCTCGTATGAAGATATAAAGGATCTCAAGTTCTTAACACGTTGCATAAATGAGTCCATGCGTCTATACCCTCATCCTCCTGTTTTGATAAGAAGAGCTAAAGTCGCTGATGTGCTTCCTGGAAATTACAAGGTCAATGCTGGTCAAGATATAATGATTTCAGTATATAATATCCATCACTCCTCTCAGGTCTGGGAAAGAGCAGAAGATTTTCTGCCGGAAAGATTCGACTTAGAAGGTCCTGTGCCTAATGAAACAAATACAGATTTCAGATTCATTCCATTTAGTGGGGGCCCACGTAAGTGTGTTGGTGATCAGTTTGCTTTGCTGGAAGCGATTGTTGCACTTGCAATCTTTGTGCAGCACATGAATTTTGAGCTGGTTCCTGATCAGAATATTAGCATGACTACCGGGGCAACTATTCATACAACAAATGGCTTGTACATGAAATTGACTCAAAGGCAAATTCCATCTGCATTTGTTCCAACATCTTCTAGGTAA 1416 43.22 MATAKLDDVSELLGGALFLPLFRWMNMYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGKYAKGLVAEVSEFLFGSGFAIAEGELWTVRRRAVVPSLHKRYLSIIVDRVFCKCAERLVENLRTDALNGSAVNMEEKFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAEARSTDLLPYWKVKALCKIIPRQIKAEESVTVIRKTVEELIAKCKEIVEREGERIDEDEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNSSSLMKAQEEVDRVLQGRSPSYEDIKDLKFLTRCINESMRLYPHPPVLIRRAKVADVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEDFLPERFDLEGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFVQHMNFELVPDQNISMTTGATIHTTNGLYMKLTQRQIPSAFVPTSSR* 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18452453 18458036 - Vvi8g1099 Vvi8g1099 791322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1099 471 SUPERFAMILY Cytochrome P450 15 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PRINTS P450 superfamily signature 267 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PRINTS P450 superfamily signature 319 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PRINTS P450 superfamily signature 398 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PRINTS P450 superfamily signature 407 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PANTHER CYTOCHROME P450 FAMILY 4 37 459 - -
Vvi8g1099 471 Gene3D Cytochrome P450 6 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 400 409 IPR017972 GO:0005506|GO:0016705
Vvi8g1099 471 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PRINTS E-class P450 group I signature 256 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PRINTS E-class P450 group I signature 276 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PRINTS E-class P450 group I signature 318 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PRINTS E-class P450 group I signature 359 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PRINTS E-class P450 group I signature 397 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PRINTS E-class P450 group I signature 407 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 Pfam Cytochrome P450 22 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1099 471 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 37 459 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1099 K09837 - vvi:100243621 931.013