Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g1122 | ATGCCGATCCGCAACATCGCCTTTGGAAGGCCCGAGGAGGCGACTCGACCCGACGCTCTTAAAGCGGCGTTTGCTGAGTTTATATGTACCTTGATTTTCGTGTTCGCCGGCGAAGGTTCCGGCATGGCCTTTAACAAACTCACTGACAACGGTTCCACCACTCCCGCTGGCCTCGTTGCCGCCTCTCTGGCTCACGCATTCGCTCTCTTTGTTGCCCTTCTTGGGTCCACCGTAGCTTGCTTGCTACTTAAGTTTTCCACCAACGGCATGACCACCAGCGCCTTCTCTCTGTCTTCAGGAGTGACAGTGTGGAACGCGTTTGTTTTCGAGATCGTGATGACCTTCGGGCTGGTGTACACAGTCTACGCCACAGCCATTGATCCAAAGAAGGGCAATTTGGGAATTATTGCACCGATTGCCATCGGTTTTATCGTGGGTGCTAACATTCTGGCAGGTGGGGCCTTCGACGGTGCCTCAATGAACCCAGCAGTATCATTTGGGCCTGCCTTGGTGAGCTGGACCTGGACCAACCACTGGGTCTACTGGGCCGGGCCTCTGATCGGAGGAGGGCTTGCTGGACTTGTGTACGAGGTCTTCTTCATCAGCCACACTCACGAGCAGCTCCCCTCCACAGACTACTGA | 642 | 55.3 | MPIRNIAFGRPEEATRPDALKAAFAEFICTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAASLAHAFALFVALLGSTVACLLLKFSTNGMTTSAFSLSSGVTVWNAFVFEIVMTFGLVYTVYATAIDPKKGNLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWTWTNHWVYWAGPLIGGGLAGLVYEVFFISHTHEQLPSTDY* | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 18763852 | 18764915 | + | Vvi8g1122 | Vvi8g1122 | 791345 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g1122 | 213 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi8g1122 | 213 | PRINTS | Major intrinsic protein family signature | 109 | 127 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi8g1122 | 213 | PRINTS | Major intrinsic protein family signature | 142 | 164 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi8g1122 | 213 | PRINTS | Major intrinsic protein family signature | 179 | 199 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi8g1122 | 213 | SUPERFAMILY | Aquaporin-like | 13 | 208 | IPR023271 | - | |
Vvi8g1122 | 213 | Gene3D | Glycerol uptake facilitator protein. | 73 | 213 | IPR023271 | - | |
Vvi8g1122 | 213 | Gene3D | Glycerol uptake facilitator protein. | 4 | 72 | IPR023271 | - | |
Vvi8g1122 | 213 | Pfam | Major intrinsic protein | 73 | 196 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi8g1122 | 213 | Pfam | Major intrinsic protein | 14 | 72 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi8g1122 | 213 | PANTHER | AQUAPORIN-8 | 73 | 213 | IPR034294 | - | |
Vvi8g1122 | 213 | PANTHER | AQUAPORIN-8 | 1 | 72 | IPR034294 | - | |
Vvi8g1122 | 213 | PANTHER | AQUAPORIN TIP1-1 | 1 | 72 | - | - | |
Vvi8g1122 | 213 | PANTHER | AQUAPORIN TIP1-1 | 73 | 213 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g1122 | K09873 | - | vvi:100233004 | 382.104 |