Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1129 ATGGTCTTTGCTTCACTCCTGATCATGTCTGTTGCAGGTGCAACTTACATGTTCAGTCTGTACTCGGGTGAAATAAAAACGTCACTGGGTTATGATCAGACCACCCTTAATTTGCTGAGCTTCTTCAAGGACCTGGGTGGCAATGTTGGGGTTCTCTCGGGCCTCATCAACGAGGTCACGCCACCTTGGGTGGTTCTCTGTATTGGCGCTGTTATGAACTTTTTTGGGTATTTCATGATCTGGCTCGCCGTCACCGACCGCATTGCCAAACCCCAGATATGGCAGATGTGTCTTTACATATGCATCGGCGCCAATTCCCAATCATTCGCCAATACCGGAGCGTTGGTTACTTGTGTTAGGAACTTCCCTGAAAGCAGAGGTATTGTTTTGGGCCTTCTGAAGGGATTTGTTGGTCTGAGTGGTGCTATCATCACACAACTCTACCGTGCTTTCTACGGAGATGATTCCAAATCTCTTATTCTATTCATTGCTTGGCTTCCGGCTGCAGTCTCCTTCGTGTTTCTTCGGACAATCAGGATCATGAAAGTAGGTCGGCAAGCAAACGAGCTCAAGGTTTTCTATGATCTTCTCTATATGTCTCTCGGCCTCGCCGGGTTTCTCATGGTTATAATCATAATACAAAACAAGTTTACCTTCTCCAGAATCGAGTATAGTGGAAGTGCTGCTGTCGTTCTTATCCTACTCTTTCTTCCGCTTGCTGTAGTCATCAAAGAGGAAATCAACATCTGGAAGGCTCCAGAAAATGCAGAGAAATCAGTTTCTTGTTTCAAAACCATGTTCAAGCCACCAGACAGAGGCGAGGACTACACCATTCTACAAGCGCTGTTCAGCATTGATATGTTGATTCTGTTCATTGTCACCACATGTGGAGTCGGAGGAACACTAACTGCTATCGACAATTTGGGGCAGATTGGCAGTTCACAGGGCTACACGGCCCACAGCACCACCACCTTCGTATCCCTCGTCAGCATATGGAATTATCTGGGTCGAGTCGTGTCTGGCTTCGCTTCCGAAATATTCTTGACAAGATACAAATTCCCCCGTCCGCTGATGCTAACTTTTGTTCTTCTTTTCTCTTGTGTTGGCCATCTTCTCATCGCCTTCGCCGTCCCCAACTCTCTTTACTTCGCCTCAGTGATCATCGGCTTCTGCTTTGGAGCCCAGTGGCCACTAGTGTTCGCCATCATATCAGAATTATTTGGCCTTAAATACTACTCCACTTTGTACAATTTCGGAGCCGTGGCAAGTCCGGTCGGGTCGTATATCCTCAACGTCAAAGTAGCCGGGCATCTCTACGACAAGGAAGCTTTGAAGCAACTGGAAGCTTCAGGTGTTACTAGGGTTGCTGGGCAGGACTTGACTTGCACAGGCGCTGCGTGTTACAAACTGTCTTTTATCATAATCACAGCAGCCACACTATTTGGGTGCATTATTTCCTTCATTTTAGTGATCCGGACCAAAAAGTTTTACCAAGGCGATATCTACAAGAAGTTCAGACAAGAAGCCAATAAAGCTGAGATTAACATGGCTTCCTCCGGAAACGGCATTCTACAATTGGGAGAAACAGAATCCAAGGCTACTATTTACAGTGCTTCTTGCTATTGTCTGTATTGTAATAATGTAATCGTGAACTTTCTGCTTTTCTATTTTGCTGTCAATATTGTAGTACCCCAAACAAAGCCAATTGGAGAGGCTTCCTATGGTGACATCCAATCTGTTTACAGCTCTTGCTTCACCTCCAACCCGTTGGCAGTAAGTGACACCGAAATCTGGAATCATCTCTGA 1806 45.85 MVFASLLIMSVAGATYMFSLYSGEIKTSLGYDQTTLNLLSFFKDLGGNVGVLSGLINEVTPPWVVLCIGAVMNFFGYFMIWLAVTDRIAKPQIWQMCLYICIGANSQSFANTGALVTCVRNFPESRGIVLGLLKGFVGLSGAIITQLYRAFYGDDSKSLILFIAWLPAAVSFVFLRTIRIMKVGRQANELKVFYDLLYMSLGLAGFLMVIIIIQNKFTFSRIEYSGSAAVVLILLFLPLAVVIKEEINIWKAPENAEKSVSCFKTMFKPPDRGEDYTILQALFSIDMLILFIVTTCGVGGTLTAIDNLGQIGSSQGYTAHSTTTFVSLVSIWNYLGRVVSGFASEIFLTRYKFPRPLMLTFVLLFSCVGHLLIAFAVPNSLYFASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGAVASPVGSYILNVKVAGHLYDKEALKQLEASGVTRVAGQDLTCTGAACYKLSFIIITAATLFGCIISFILVIRTKKFYQGDIYKKFRQEANKAEINMASSGNGILQLGETESKATIYSASCYCLYCNNVIVNFLLFYFAVNIVVPQTKPIGEASYGDIQSVYSSCFTSNPLAVSDTEIWNHL* 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18809102 18811614 - Vvi8g1129 Vvi8g1129 791352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1129 601 Pfam Nodulin-like 1 243 IPR010658 -
Vvi8g1129 601 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 252 523 - -
Vvi8g1129 601 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 250 - -
Vvi8g1129 601 PANTHER MFS TRANSPORTER 252 523 - -
Vvi8g1129 601 PANTHER MFS TRANSPORTER 1 250 - -
Vvi8g1129 601 CDD MFS_Mch1p_like 3 483 - -
Vvi8g1129 601 SUPERFAMILY MFS general substrate transporter 3 498 IPR036259 -
Vvi8g1129 601 Gene3D MFS general substrate transporter like domains 279 497 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g1129 Vvi13g567 ECH
Vvi8g1129 Vvi13g566 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1129 - - cit:102618763 851.277