Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1146 ATGGCTACATCTATAGTCTACAGATCCCCTCGTCCACATGTCGATATACCAAATGATCCAAGCATTTCCATGCTCTCTTTCCTTTTCAGAAAAACCTCATCATTTTCTACTAGGCTCGCCCTCGTCGACTCCGACTCCGGCGAAACACTGACCTTCTTCCAGCTCAAGTCCACCGTCTCCAGGCTTGCTCACAGCTTTGCCCAATTAGGCATCACCAAAAACGACGTCGTTCTCATTTTTGCTCCCAACTCGGTCCGCTTCCCCGTTTGCTTCCTCGCCATCGTCGCTCTTGGAGCAATCGCCACCACAGCTAATCCTCTTTACACCATTTCGGAGCTTTCCAAGCAAGTCAAAGACTCCAACCCTAAATTCGTTATCAATCTTTGGGATAAGGTCAAGAATTTCGATTTAACATTTGTGATTTTGAGTTCTTCAGCGTCTCAGAGACTCCCAAGTTCGAATTCCAGGGTCTGGTACTATTCCGATTTGATTAAAACGCCAGAGGACAGAGATTTGGATTTTCCGCCGGCTTCGGTGGTGCAAACAGATACCGTGGCGCTGCTGTACTCGTCGGGCACCACCGGAACGAGCAAGGGAGTGATTCTGACGCACCGCAATTTCATTGCGGCAGGGGTGATGGTGACGGCGGACCAAGCGTATTACGGCGAAAGCAGTAACGTGTTTCTATGTTTTTTGCCTATGTTTCATATATTTGGGCTGTCTGTCATATTGTATGCCCAGCTTGTGAGGGGCAACACTGTTGTAACAGTAGCGAAGTTCGAAATCGAGAAGGTTTTAAGGAGTGTAGAGAAGTATAGGGTGACTCATATGTTTGTTGTTCATCCTGTTATGATTGCTTTGGCGAAGCAGAGTGTGGTCCGGAAGTATGATTTGTCGTCACTGAGGCAAATTTGTTCCGGGGCGGCTCCTTTGGGAAAGGATGTGATGGATGATTGTGCTAAGAATGTTCCTCAAGCTGCTGTCATTCAGGTATTCAAACCGAGAATTGGAATTTATCTTCAACTTTTACTGATAAATTTCGACCCGGGAAAGTTGAACATATGTGCTCCTGGGAGTAATGTCTCGGCCTACACCCTAGCTCGTGTGGTAGAGACACCAAGGGCTGCAACAAGATTGATACAAGGAATGAGGGGTGACAACAAGACTGTCAACCACACGCCGCCTAACACAAGTGACTTAGAATATCTACTGTTTAAAGAAGTTGCTCAAACTGAAGCTAATAGGGAGCTTGAAGCAACAAATGATCTAGAAATTGTCCAACTAAAGGCTCCTAGCAGCATGTTCCTAATCATGTTTAATTTCTCCTATGTAGTTTTTGTCATAAAGCTGCATCATGATTCAAAATGCACCATGTGGTATTCAAGCTCTCGTCATTCTGGTTCAACTGGCATTCTCGTTCCAAGAGTTGAATCACAAATAGTTAGTGAAGATACATTGAAGCCTCTTCCACCAAATCAATTAGGTGAAATATGGGTTCAAGGGGCAAACATGATGCAGGGTTATTTTAACAATCCACAAGCCACAAAACTGACTATAGATGAACAAGGTTGGGTACGTACAGGAGATCTTGGGTATTTTGATGAAGGGGGACAATTGTTTGTTGTGGATCGAATAAAAGAGCTTATCAAGTTTAAAGGCTTCCAGGTAGCACCAGCTGAGCTTGAAGGGCTGCTGCTTTCTCACCCTGAAATATTAGATTCTGTTGTCATCCCACTTCCAGATGTTGAAGCTGGCGAGGTCCCAATTGCATATGTAGTTCGTTCTCCCAGAAGCTCACTAACTGAAGAAGATGTTCAGAAATTTATTGCAAAACAGGTTGCACCATTCAAAAGATTACGAAGAGTAACTTTTATAAACAATGTTCCAAAGTCAGCTTCAGGAAAGATTCTCAGAAGAGAGCTCATAGAGAAAGTTCGATCCAAGATCTAA 1950 44.21 MATSIVYRSPRPHVDIPNDPSISMLSFLFRKTSSFSTRLALVDSDSGETLTFFQLKSTVSRLAHSFAQLGITKNDVVLIFAPNSVRFPVCFLAIVALGAIATTANPLYTISELSKQVKDSNPKFVINLWDKVKNFDLTFVILSSSASQRLPSSNSRVWYYSDLIKTPEDRDLDFPPASVVQTDTVALLYSSGTTGTSKGVILTHRNFIAAGVMVTADQAYYGESSNVFLCFLPMFHIFGLSVILYAQLVRGNTVVTVAKFEIEKVLRSVEKYRVTHMFVVHPVMIALAKQSVVRKYDLSSLRQICSGAAPLGKDVMDDCAKNVPQAAVIQVFKPRIGIYLQLLLINFDPGKLNICAPGSNVSAYTLARVVETPRAATRLIQGMRGDNKTVNHTPPNTSDLEYLLFKEVAQTEANRELEATNDLEIVQLKAPSSMFLIMFNFSYVVFVIKLHHDSKCTMWYSSSRHSGSTGILVPRVESQIVSEDTLKPLPPNQLGEIWVQGANMMQGYFNNPQATKLTIDEQGWVRTGDLGYFDEGGQLFVVDRIKELIKFKGFQVAPAELEGLLLSHPEILDSVVIPLPDVEAGEVPIAYVVRSPRSSLTEEDVQKFIAKQVAPFKRLRRVTFINNVPKSASGKILRRELIEKVRSKI* 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18961966 18973771 + Vvi8g1146 Vvi8g1146 791369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1146 649 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Vvi8g1146 649 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 648 - -
Vvi8g1146 649 SUPERFAMILY Acetyl-CoA synthetase-like 461 646 - -
Vvi8g1146 649 CDD 4CL 16 641 - -
Vvi8g1146 649 Pfam AMP-binding enzyme 460 551 IPR000873 -
Vvi8g1146 649 Pfam AMP-binding enzyme 33 330 IPR000873 -
Vvi8g1146 649 Gene3D - 547 648 IPR045851 -
Vvi8g1146 649 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 5 648 - -
Vvi8g1146 649 Pfam AMP-binding enzyme C-terminal domain 560 635 IPR025110 -
Vvi8g1146 649 Gene3D - 447 546 IPR042099 -
Vvi8g1146 649 Gene3D - 4 334 IPR042099 -
Vvi8g1146 649 SUPERFAMILY Acetyl-CoA synthetase-like 16 330 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g1078 Vvi8g1146 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1146 K01904 - vvi:100267423 501.13