Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1193 ATGGAAGCCAAAATGGGAAAGTTCTTCGAGTCCGTCGGAGCATTCTTCGGCGGCGGCGATCAGATCCCGTGGTGCGACCGTGATGTAATCGCTGGTTGTGAAAAAGAGGTGGCGGATGCTGCCAATGGTGGTTCTGAGGAACACAAGAGTGAATGCATTATGCGGTTATCATGGGCTCTTGTTCATTCTAGACAAGCTGAAGATATACAGCGTGGGATCGCAATGCTTGAAGCTTCTCTAACAAGTAGCAGCAGCCCATTGCAAAAGAAGGAGAAACTTTATCTTCTGGCAGTTGGATATTACAGAAGTGGCGAATATGGTAAAAGCAGGCAGCTTGTGGAACAGTGCTTGGAGATTGCGCCTGATTTTAGGCAGGCTCTGACCCTTAAGAAGACAGTTGAAGATCGGATTGCTAAAGATGGTGTTATTGGAATAGGCATTACGGCTACTGCTGTAGGACTCATTGCTGGTGGCATTGCTGCAGCATTGGCCAGGAAGAAGTGA 504 48.02 MEAKMGKFFESVGAFFGGGDQIPWCDRDVIAGCEKEVADAANGGSEEHKSECIMRLSWALVHSRQAEDIQRGIAMLEASLTSSSSPLQKKEKLYLLAVGYYRSGEYGKSRQLVEQCLEIAPDFRQALTLKKTVEDRIAKDGVIGIGITATAVGLIAGGIAAALARKK* 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19457870 19462315 - Vvi8g1193 Vvi8g1193 791416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1193 167 Pfam Fis1 C-terminal tetratricopeptide repeat 90 142 IPR028061 -
Vvi8g1193 167 SUPERFAMILY TPR-like 10 167 IPR011990 GO:0005515
Vvi8g1193 167 PIRSF TPR_repeat_11_Fis1 4 166 IPR016543 GO:0000266
Vvi8g1193 167 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 1 166 IPR016543 GO:0000266
Vvi8g1193 167 Gene3D Tetratricopeptide repeat domain 24 167 IPR011990 GO:0005515
Vvi8g1193 167 Pfam Fis1 N-terminal tetratricopeptide repeat 51 82 IPR028058 -
Vvi8g1193 167 PANTHER MITOCHONDRIAL FISSION 1 PROTEIN 1 166 - -
Vvi8g1193 167 CDD Fis1 23 141 IPR033745 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g1028 Vvi8g1193 ECH
Vvi6g164 Vvi8g1193 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1193 K17969 - vvi:100853169 282.722