Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g1247 | ATGACGAAACAACATCTGCGGTTATTCCTCATTGTAATTGTGTTTTCGGTGTTCATCACTTTGCAAGCTTCGGCTATTACAGATCCACGGGATGATTACAGAATAATTCCCTCCTTTTTACTTTCTGCAGTGGCAGCTCTTCAAGACTTGTACAAGGAACTGAACTACCCACCACAGTTGGAGAAGTGGAGATCATATGCTGGGGATCCATGTGATGAATCATGGAAAGGAATCTCATGTTCTGGTTCAACTGTCATTTTCATTCAGCTTCCAGGACTAAATCTCGGTGGACATCTTGGAGGCCAGCTCCATAATCTCCATAATTTGAAGCAACTGGATGTTAGCTCCAATAACATTCAAGGTGAAATTCCTTACGGGTTACCCCCTAATGCCACTCATATAAATTTGGCATGCAACAAATTTAGTCAAAATATCCCCAACTCCCTCACTTTCATGAAGAATCTTCGACATCTGAATCTGAGCCACAATTCATTATCTGGACCCATTGGCAATGTGTTTACTGGCCTACAGAATCTAAAAGAAATGGATCTATCACACAATCACTTTACTGGAGATCTGCCAAGTTCATTTGGAACTTTGAAAAATCTTACTAGATTGTTCTTGCAGAATAACAAGTTTACTGGGTCTGTGATCTTCTTGGCTGATCTCCCACTGTCTCACTTGAACATCCAAAGTAACCATTTTAGTGGCATTATTCCAAGGCAATTTCAGTTGATACCAAATTTATGGTTTGGGGGGAATAGATTCCATCCAGGGGGGAACTATCCACCCTGGGATTTCCCTTTGGAAACTGAGCAGAATATTAATAGCCCACCGACAACTGAATCAAGTGCTGTTGAGAACTACCCCTCTAGAAAAGCACATGAACGCAAGAAGAAAAGGCTGGGTCCTGGAGGAATAGCTCTCATGGTTGGTGGAGGAACTCTGTTGGTAAGCTGTGCAGCACTCCTACTTACTGTCCGCATTAATCGAGCTCGTGCACAAACGCACAAAAGCTTGGAGGGCAGTGAAAGCGCACTGCATTGTATTCCAACCACTACAGTCGAAGAAGAGAGCCCACAAATCTTGGCTCTCAGTCCACCAACGTTTATGTCAAGGCCAATTCCCACTGCTCGCAATGTCAGATTTGAGAAAATTTGCTCCAGAAGAAGTTTCTCTAAGAAATCCAGAATCCCAGCAAATGCAAAGCTTTACACTGTGGCAGAGCTTCAACTAGCTACAAACAGCTTCAGTGAAGAGAACCTTCTTGGAGAAGGATCCCTTGGTTCTGTTTACAAAGGAGAGTTTCCTGATGGCCAAGTCATGGCTGTGAAAAACATAAACACAGTCTCACTCTCTCTCCATGAAGAAGAACAATTCTTGGATGTGATATGGACCGCAGCTCGTTTGAGGCATCCAAACATTGTAACACTTCTTGGGTATTGTGTGGAGCACGGACAGCATCTCCTTGTGTACAAGTTTGTCAGAAATTTGTCTCTTGATGATGCACTGCACTGTGAAGTATACAAGCCTCTGTCTTGGAGCCTCCGACTCCAGATTGCCCTCGGCATTGCACGTGCTTTGAACTATTTGCACTCTGTATGTTCACCTCCTATTGCCCATTGCAACCTAAAGGCCGCCAACATCTTACTTGATGAAGAGCTTACACCTCATATCTGTGACACAGGGCTAGCCGTTTTAAGGCCACTTACAAGCAACACTGTTAAACTGAAGGCTTCTGAGATGGCTATTGGCAATTGTGGCTACATTGCACCTGAACATGGCCAGCCTGGAATCGATAACAAGAAGAGTGATGTATATGCCTTTGGAGTGCTGCTTTTAGAGCTACTAACAGGAAGAAGGCCATTCGATAGTTCAAGATCAAGGGAAGAGCAATCTTTGGTGAAATGGGCTTCTGCCCGGCTTCATGACAATGATTCTTTGGGACAGATGGTTGATTCAGGCATCAAAGGAACTTTCTCCTCCAAGGCTCTCTCACAATATGCAGATATTGTCTCTCTCTGCATTCAGCCCGAGAAAGAATTCAGACCACCAATGACGGAAGTTGTGGAATCTGTTAGACGTCTGTTACAAAAGACGAGAAGCAGGTTAATTGAGGGTGGCGAAGTTGAGGTTGAGGGCTTCGATAAATCTTTCCATTCCACGAACACCCGCTTTGTAGGCTCACCATCAATGAGCATTATGTCCGCCTGA | 2214 | 44.13 | MTKQHLRLFLIVIVFSVFITLQASAITDPRDDYRIIPSFLLSAVAALQDLYKELNYPPQLEKWRSYAGDPCDESWKGISCSGSTVIFIQLPGLNLGGHLGGQLHNLHNLKQLDVSSNNIQGEIPYGLPPNATHINLACNKFSQNIPNSLTFMKNLRHLNLSHNSLSGPIGNVFTGLQNLKEMDLSHNHFTGDLPSSFGTLKNLTRLFLQNNKFTGSVIFLADLPLSHLNIQSNHFSGIIPRQFQLIPNLWFGGNRFHPGGNYPPWDFPLETEQNINSPPTTESSAVENYPSRKAHERKKKRLGPGGIALMVGGGTLLVSCAALLLTVRINRARAQTHKSLEGSESALHCIPTTTVEEESPQILALSPPTFMSRPIPTARNVRFEKICSRRSFSKKSRIPANAKLYTVAELQLATNSFSEENLLGEGSLGSVYKGEFPDGQVMAVKNINTVSLSLHEEEQFLDVIWTAARLRHPNIVTLLGYCVEHGQHLLVYKFVRNLSLDDALHCEVYKPLSWSLRLQIALGIARALNYLHSVCSPPIAHCNLKAANILLDEELTPHICDTGLAVLRPLTSNTVKLKASEMAIGNCGYIAPEHGQPGIDNKKSDVYAFGVLLLELLTGRRPFDSSRSREEQSLVKWASARLHDNDSLGQMVDSGIKGTFSSKALSQYADIVSLCIQPEKEFRPPMTEVVESVRRLLQKTRSRLIEGGEVEVEGFDKSFHSTNTRFVGSPSMSIMSA* | 738 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 20037652 | 20042794 | - | Vvi8g1247 | Vvi8g1247 | 791470 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g1247 | 737 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 24 | 700 | - | - | |
Vvi8g1247 | 737 | SUPERFAMILY | L domain-like | 45 | 250 | - | - | |
Vvi8g1247 | 737 | ProSiteProfiles | Protein kinase domain profile. | 417 | 697 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g1247 | 737 | Pfam | Leucine rich repeat N-terminal domain | 43 | 81 | IPR013210 | - | |
Vvi8g1247 | 737 | SMART | LRR_typ_2 | 106 | 130 | IPR003591 | - | |
Vvi8g1247 | 737 | SMART | LRR_typ_2 | 176 | 199 | IPR003591 | - | |
Vvi8g1247 | 737 | SMART | LRR_typ_2 | 200 | 221 | IPR003591 | - | |
Vvi8g1247 | 737 | SMART | LRR_typ_2 | 152 | 175 | IPR003591 | - | |
Vvi8g1247 | 737 | Pfam | Leucine rich repeat | 172 | 213 | IPR001611 | GO:0005515 | |
Vvi8g1247 | 737 | Gene3D | Ribonuclease Inhibitor | 42 | 269 | IPR032675 | - | |
Vvi8g1247 | 737 | Gene3D | Phosphorylase Kinase; domain 1 | 379 | 494 | - | - | |
Vvi8g1247 | 737 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 | 24 | 700 | - | - | |
Vvi8g1247 | 737 | Gene3D | Transferase(Phosphotransferase) domain 1 | 495 | 712 | - | - | |
Vvi8g1247 | 737 | Pfam | Protein tyrosine and serine/threonine kinase | 420 | 692 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi8g1247 | 737 | MobiDBLite | consensus disorder prediction | 272 | 288 | - | - | |
Vvi8g1247 | 737 | MobiDBLite | consensus disorder prediction | 272 | 298 | - | - | |
Vvi8g1247 | 737 | SUPERFAMILY | Protein kinase-like (PK-like) | 393 | 691 | IPR011009 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76787 | PF07714 | PK_Tyr_Ser-Thr | 3.90E-36 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g1247 | - | - | vvi:100252106 | 1408.66 |