Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1257 ATGAAGGAAAATAATAGAAAATTTATAAAATTTATATTAATTATTACATTTGGATTATTTATTAATAGGATCTCATTAAACCCAAACTATTTTGGTTCATATATTTTAATTCATCTCTATTCTTATTTCTATTGGAATTTCTATTTTAGCATTCCAAAGCACGGCTATTTTTTCTTTTTTTTCCACCCAAAAAAGTTCAAGGAGGTCCAAAACGCCATGGTCAGGGCTGTCAAACGTGAAGTGGGTAGTAGTAGCAGAGCGAATGCAAACGAAGCCGGAGCGGATAATTCAGGTCACCAAGGTGTGACTGAACGTAGAGTCCTGCGCTCACGGTACCTCGCCGTGAAGAATCAAATTTGCGATGGGAGAGAGGACATTACCAAAGTTGATTCTGATAAGTTTAAGTCGATCATCAATGAGGTTGAAAGCTTGCATCAGCAAGTACAGAAGCCAAGAGAACAGGTTGCAGATGCAGAGGCTCTTTTGGACATCACAAACACCTTAGTAACCTCTGTGAAGGCTCATGGCAATGAAGGAATTACCCCTTCGGATTTTGTATCCTGTCTTCTTCAGGAGTTTGGGCAAAATCCCGGAGTAAGCACTAGTGCTGAGGATGCTGGGAACTCGATTGTTTGGAAGGACATAGGCCTTGTAGTCTCACATATTTTCAAAAGGGCTTCTGGATGTTGCACTATGCTTGGACCTATGAATACTGAAATGAAGCAACGAAAGCCTGTTGTTCATAATAAGCGTGTGAGACCAACCGAAAGTGCTCGGCCTGAAGAGCTTGATGATACTGTCGTGGAAGAGAAATCTGATACTGATAAGAATATGTCAATTATGTTTGATATCTTGAGGAAGAATAGAAGGGTCAGGCTCGAAAATCTCATTTTGAATAGAAACTCCTTTGCCCAGACAGTGGAAAATTTATTTGCTCTGTCATTTCTTGTAAAAGATGGGCGGGCGGAAATAACTGTGGATGGGAGAGGCTGCCATCTAGTTTCACCAAGGAATGCTCCTGCTGCCAATGCCGTTGTCTCAGGGGAGGTCTGTTACAACCACTTTGTCTTCAGATTTGACTTTAAGGATTGGAAGTTGATGGCAACTTCTGTTGGAGCTGGAGAGGAGCTGATGCCGCAAAGGAATTCGGTAAACCTACCTAACAACTCTCAAACAGACTCAGTAGCTGAAGAATGTGAAGCAGCAGCAGCACCTACAACGCCAATTAGGAAGTTGTCTAGGAATCGTGGTCTGGTTTTACAGGAGCAGGCTGTGGTGGAAGACTCACCAGAAAGTGATGATGCAGGAACAAGAGCTGCTGTCATCCGAAAGGGAAAGGGAAAGCGGAAGCTGAGGTGA 1359 42.53 MKENNRKFIKFILIITFGLFINRISLNPNYFGSYILIHLYSYFYWNFYFSIPKHGYFFFFFHPKKFKEVQNAMVRAVKREVGSSSRANANEAGADNSGHQGVTERRVLRSRYLAVKNQICDGREDITKVDSDKFKSIINEVESLHQQVQKPREQVADAEALLDITNTLVTSVKAHGNEGITPSDFVSCLLQEFGQNPGVSTSAEDAGNSIVWKDIGLVVSHIFKRASGCCTMLGPMNTEMKQRKPVVHNKRVRPTESARPEELDDTVVEEKSDTDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFALSFLVKDGRAEITVDGRGCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEELMPQRNSVNLPNNSQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQEQAVVEDSPESDDAGTRAAVIRKGKGKRKLR* 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20172215 20175669 + Vvi8g1257 Vvi8g1257 791480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1257 452 PANTHER UNCHARACTERIZED 71 444 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vvi8g1257 452 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 71 444 - -
Vvi8g1257 452 MobiDBLite consensus disorder prediction 424 452 - -
Vvi8g1257 452 Pfam Nse4 C-terminal 291 377 IPR014854 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g128 Vvi8g1257 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1257 K22825 - vvi:100255522 725.702